RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DDR2Q16832 855 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 DEFB128Q7Z7B8 93 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 SH2D3CQ8N5H7 860 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ZSCAN18Q8TBC5 510 aaPredicted RBP17.74■□□□□ 0.43
VPS13B-201ENST00000355155 TRIM43Q96BQ3 446 aaPredicted RBP17.74■□□□□ 0.43
VPS13B-201ENST00000355155 FERMT1Q9BQL6 677 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 UBE2OQ9C0C9 1292 aaKnown RBP17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ETNK1Q9HBU6 452 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 GCAP28676 217 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 GPX6P59796 221 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 PARP6Q2NL67 630 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ANKRD20A2Q5SQ80 823 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ANKRD20A1Q5TYW2 823 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ANKRD20A3Q5VUR7 823 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 KLHDC10Q6PID8 442 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ZNF534Q76KX8 674 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 DDX53Q86TM3 631 aaKnown RBP17.74■□□□□ 0.43
VPS13B-201ENST00000355155 CNPY4Q8N129 248 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 PDIK1LQ8N165 341 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ATP11CQ8NB49 1132 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 ATAD1Q8NBU5 361 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 MYRFLQ96LU7 910 aa17.74■□□□□ 0.43
VPS13B-201ENST00000355155 TLR8Q9NR97 1041 aaKnown RBP17.74■□□□□ 0.43
VPS13B-201ENST00000355155 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 CDH16O75309 829 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 TUFMP49411 452 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 WDR5P61964 334 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 PDIA2Q13087 525 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 C5orf22Q49AR2 442 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 MSS51Q4VC12 460 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 VPS52Q8N1B4 723 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 P2RY11Q96G91 374 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 GMIPQ9P107 970 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 NOVA2Q9UNW9 492 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 DOCK4Q8N1I0 1966 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 RGS16O15492 202 aaPredicted RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 ACSL3O95573 720 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 KPNA1P52294 538 aaPredicted RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 MLLT6P55198 1093 aaPredicted RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 TNK2Q07912 1038 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 NR1H3Q13133 447 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 PSMD5Q16401 504 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 CAND1Q86VP6 1230 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 CEP57Q86XR8 500 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 TTC9BQ8N6N2 239 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 EPS8L3Q8TE67 593 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 TRMT2BQ96GJ1 504 aaKnown RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 ZNF558Q96NG5 402 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 PRDM5Q9NQX1 630 aaPredicted RBP17.73■□□□□ 0.43
VPS13B-201ENST00000355155 RAB6BQ9NRW1 208 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 TRHDEQ9UKU6 1024 aa17.73■□□□□ 0.43
VPS13B-201ENST00000355155 SLC38A8A6NNN8 435 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 CREB3O43889 395 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 SUN1O94901 812 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 METTL18O95568 372 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 PHBP35232 272 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 FASTKD3Q14CZ7 662 aaKnown RBP17.72■□□□□ 0.43
VPS13B-201ENST00000355155 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 NPWQ8N729 165 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 COLGALT1Q8NBJ5 622 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 CATSPERBQ9H7T0 1116 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 XAB2Q9HCS7 855 aaKnown RBP17.72■□□□□ 0.43
VPS13B-201ENST00000355155 PAGE1O75459 146 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 CPB1P15086 417 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 ATF6P18850 670 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 ITGB8P26012 769 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 GARSP41250 739 aaKnown RBP17.72■□□□□ 0.43
VPS13B-201ENST00000355155 TUBP50607 506 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 SLC18A1P54219 525 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 BASP1P80723 227 aaKnown RBP17.72■□□□□ 0.43
VPS13B-201ENST00000355155 COG7P83436 770 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 DNAJC21Q5F1R6 531 aaKnown RBP17.72■□□□□ 0.43
VPS13B-201ENST00000355155 KCTD16Q68DU8 428 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 MAML1Q92585 1016 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 C9orf72Q96LT7 481 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 CLSTN3Q9BQT9 956 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 CAPS2Q9BXY5 557 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 ACSS3Q9H6R3 686 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 RABGEF1Q9UJ41 708 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 PLXNA4Q9HCM2 1894 aa17.72■□□□□ 0.43
VPS13B-201ENST00000355155 ALPK3Q96L96 1907 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 C1QAP02745 245 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 MDH1P40925 334 aaKnown RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 MAGOHP61326 146 aaKnown RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 HTRA4P83105 476 aaPredicted RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 GAD2Q05329 585 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 RAB33AQ14088 237 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 ARMC3Q5W041 872 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 NLRP14Q86W24 1093 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 ARHGAP12Q8IWW6 846 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 TMEM199Q8N511 208 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 CCDC110Q8TBZ0 833 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 AZIN2Q96A70 460 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 PAWRQ96IZ0 340 aaKnown RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 HBS1LQ9Y450 684 aaKnown RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 DNAH12Q6ZR08 3092 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms