RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 SSTR1P30872 391 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 DPYSL3Q14195 570 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 SPATA31D4Q6ZUB0 917 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 CREG2Q8IUH2 290 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 PHACTR4Q8IZ21 702 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 LENG9Q96B70 501 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 PSD3Q9NYI0 1048 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 SPASTQ9UBP0 616 aa15.26■□□□□ 0.03
COL17A1-201ENST00000353479 VAPBO95292 243 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 NPY2RP49146 381 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 PSEN1P49768 467 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 MARSP56192 900 aaKnown RBP15.25■□□□□ 0.03
COL17A1-201ENST00000353479 MBTD1Q05BQ5 628 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 IRF2BP2Q7Z5L9 587 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 RBM23Q86U06 439 aaKnown RBP15.25■□□□□ 0.03
COL17A1-201ENST00000353479 LRRC34Q8IZ02 419 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 CCDC126Q96EE4 140 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 TTPALQ9BTX7 342 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 RIPK2O43353 540 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 CXCL14O95715 111 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 TRPM8Q7Z2W7 1104 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 TUBGCP3Q96CW5 907 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 CMTM5Q96DZ9 223 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 TEX12Q9BXU0 123 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 PHTF1Q9UMS5 762 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 HNRNPCL1O60812 293 aaKnown RBP15.25■□□□□ 0.03
COL17A1-201ENST00000353479 MSH3P20585 1137 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 CYP2C18P33260 490 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 CD151P48509 253 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 RAP1GDS1P52306 607 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 JAG1P78504 1218 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 MRPS5P82675 430 aaKnown RBP15.25■□□□□ 0.03
COL17A1-201ENST00000353479 VAT1Q99536 393 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 POLR1EQ9GZS1 481 aaKnown RBP15.25■□□□□ 0.03
COL17A1-201ENST00000353479 NCANO14594 1321 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 GOLGA8TH3BQL2 631 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 ADAMTS3O15072 1205 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 TCN1P20061 433 aaPredicted RBP15.25■□□□□ 0.03
COL17A1-201ENST00000353479 SLC45A4Q5BKX6 768 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 NFKBIZQ9BYH8 718 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 LTBP3Q9NS15 1303 aa15.25■□□□□ 0.03
COL17A1-201ENST00000353479 RCCD1A6NED2 376 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 GPR25O00155 361 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 XPO1O14980 1071 aaKnown RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ETS1P14921 441 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 SOAT1P35610 550 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 MMRN1Q13201 1228 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 CAMK2GQ13555 558 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ACOX1Q15067 660 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 DNAL1Q4LDG9 190 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 KDM7AQ6ZMT4 941 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 LRRN4CLQ8ND94 238 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 DACT3Q96B18 629 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 TBC1D3BA6NDS4 549 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 SYCE1LA8MT33 242 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 CST3P01034 146 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 SGCGQ13326 291 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 KRT72Q14CN4 511 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ZNF470Q6ECI4 717 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 C16orf89Q6UX73 402 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 IRF2BP1Q8IU81 584 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 PRKD2Q9BZL6 878 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 STN1Q9H668 368 aaKnown RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ZDHHC6Q9H6R6 413 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 NAALADL1Q9UQQ1 740 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ERI2A8K979 691 aaKnown RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 B2RBV5 119 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 RBP1P09455 135 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 CPA2P48052 419 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 INPP5AQ14642 412 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 NPY5RQ15761 445 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 SH3D19Q5HYK7 790 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 CAVIN3Q969G5 261 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 THTPAQ9BU02 230 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 TMEM51Q9NW97 253 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 OR6C75A6NL08 312 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 OPLAHO14841 1288 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ATP5BP06576 529 aaKnown RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 OR4Q2P0C623 313 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 EPB42P16452 691 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 INPP1P49441 399 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 PDE1CQ14123 709 aaPredicted RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ARMC12Q5T9G4 340 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 MARCKSL1P49006 195 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 GALNTL6Q49A17 601 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 OTOP2Q7RTS6 562 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 NRBF2Q96F24 287 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 ZNF333Q96JL9 665 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 C17orf80Q9BSJ5 609 aa15.24■□□□□ 0.03
COL17A1-201ENST00000353479 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
COL17A1-201ENST00000353479 GCKP35557 465 aa15.23■□□□□ 0.03
COL17A1-201ENST00000353479 HIRAP54198 1017 aaPredicted RBP15.23■□□□□ 0.03
COL17A1-201ENST00000353479 LRRC38Q5VT99 294 aa15.23■□□□□ 0.03
COL17A1-201ENST00000353479 PLPP4Q5VZY2 271 aa15.23■□□□□ 0.03
COL17A1-201ENST00000353479 NLRP9Q7RTR0 991 aa15.23■□□□□ 0.03
COL17A1-201ENST00000353479 RD3Q7Z3Z2 195 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms