RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ALFQ53S48 1182 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 PRRC2BQ5JSZ5 2229 aaKnown RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 ZNF746Q6NUN9 644 aaPredicted RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 SDR16C5Q8N3Y7 309 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 MARVELD2Q8N4S9 558 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 CLHC1Q8NHS4 586 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 MADDQ8WXG6 1647 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 HDHD2Q9H0R4 259 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 IL25Q9H293 177 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 GPRC5DQ9NZD1 345 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 TMCC3Q9ULS5 477 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 REXO2Q9Y3B8 237 aaKnown RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 STON1Q9Y6Q2 735 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 TRDMT1O14717 391 aaKnown RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 CD3EAPO15446 510 aaKnown RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 CRTAMO95727 393 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 CD4P01730 458 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 SLC4A1P02730 911 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 ITGALP20701 1170 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 TSNQ15631 228 aaKnown RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 BORAQ6PGQ7 559 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 ZNF467Q7Z7K2 595 aaPredicted RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 AADATQ8N5Z0 425 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 KCTD14Q9BQ13 255 aaPredicted RBP5.15□□□□□ -1.59
SKP1-202ENST00000353411 ZNF696Q9H7X3 374 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 SEC31BQ9NQW1 1179 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 RAB6BQ9NRW1 208 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 HESX1Q9UBX0 185 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 KIAA1210Q9ULL0 1709 aa5.15□□□□□ -1.59
SKP1-202ENST00000353411 PIPSLA2A3N6 862 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 K7EPI3 171 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TOP3BO95985 862 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 BCAR1P56945 870 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TAGLNQ01995 201 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 SQLEQ14534 574 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DGKDQ16760 1214 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PHC2Q8IXK0 858 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 SPAG16Q8N0X2 631 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ZSWIM2Q8NEG5 633 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 HDAC2Q92769 488 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 ISOC1Q96CN7 298 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TINF2Q9BSI4 451 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 KLF15Q9UIH9 416 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.14□□□□□ -1.59
SKP1-202ENST00000353411 B3GNT3Q9Y2A9 372 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 FAM92AA1XBS5 289 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MYO1GB0I1T2 1018 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 KPNA3O00505 521 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 HNRNPDLO14979 420 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 EXTL3O43909 919 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TCEA3O75764 348 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ATP6V1B2P21281 511 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 AMPD1P23109 780 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 NFX1Q12986 1120 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 NECAB2Q7Z6G3 386 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 GALNT7Q86SF2 657 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 GATA6Q92908 595 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.14□□□□□ -1.59
SKP1-202ENST00000353411 HES6Q96HZ4 224 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 WDR11Q9BZH6 1224 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 LRRC19Q9H756 370 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 CHRNB1P11230 501 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 IL4RP24394 825 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TFDP3Q5H9I0 405 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 CCNYL2Q5T2Q4 361 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 VWA5B1Q5TIE3 1220 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 STYK1Q6J9G0 422 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ISLR2Q6UXK2 745 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 KIF18BQ86Y91 864 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TBC1D10CQ8IV04 446 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 MAGEE2Q8TD90 523 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 NXNL1Q96CM4 212 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ZNF347Q96SE7 839 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 CPNE5Q9HCH3 593 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 LRRC4BQ9NT99 713 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 HSPBP1Q9NZL4 362 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 NUP50Q9UKX7 468 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 KCNE2Q9Y6J6 123 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 NEDD4P46934 1319 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 E7ENX8 843 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 HAT1O14929 419 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PDE8AO60658 829 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TMCC2O75069 709 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 FGFR3P22607 806 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 BDNFP23560 247 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 PON1P27169 355 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 RXRGP48443 463 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 TMBIM6P55061 237 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DGKKQ5KSL6 1271 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 ZNF571Q7Z3V5 609 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 ILDR1Q86SU0 546 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 TREML1Q86YW5 311 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 BBS7Q8IWZ6 715 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 SPARTQ8N0X7 666 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 BPIFB6Q8NFQ5 453 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 VANGL1Q8TAA9 524 aaPredicted RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 MNTQ99583 582 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 DHX33Q9H6R0 707 aaKnown RBP5.14□□□□□ -1.59
SKP1-202ENST00000353411 CAB39LQ9H9S4 337 aa5.14□□□□□ -1.59
SKP1-202ENST00000353411 NCKIPSDQ9NZQ3 722 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms