RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 XKR4Q5GH76 650 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 TWF2Q6IBS0 349 aaKnown RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 FUT10Q6P4F1 479 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 POLNQ7Z5Q5 900 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 ERICH1Q86X53 443 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 SYNPOQ8N3V7 929 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 BEST2Q8NFU1 509 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 EXD1Q8NHP7 514 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 IFT81Q8WYA0 676 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 TMEM176AQ96HP8 235 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 HPDLQ96IR7 371 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 FCRL3Q96P31 734 aaPredicted RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 ELOVL4Q9GZR5 314 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 MIS12Q9H081 205 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 SMYD3Q9H7B4 428 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 DPP3Q9NY33 737 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 PARP2Q9UGN5 583 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 CHORDC1Q9UHD1 332 aaPredicted RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 FAM153AQ9UHL3 310 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.57□□□□□ -1.04
CD44-205ENST00000352818 AGAP1Q9UPQ3 857 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 CSMD1Q96PZ7 3565 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 NUP205Q92621 2012 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 SIGLEC16A6NMB1 481 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 O00370 1275 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CAPN9O14815 690 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 DAPK3O43293 454 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 XPOTO43592 962 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 SH3BP5O60239 455 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 RNF40O75150 1001 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 ECEL1O95672 775 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 SETSIPP0DME0 302 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 RARAP10276 462 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 KCNE1P15382 129 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CYP3A5P20815 502 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 COILP38432 576 aaPredicted RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 GGCXP38435 758 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CETN2P41208 172 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TAS2R40P59535 323 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 DMTNQ08495 405 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 LMAN2Q12907 356 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 KLF1Q13351 362 aaPredicted RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 HLTFQ14527 1009 aaKnown RBP eCLIP8.56□□□□□ -1.04
CD44-205ENST00000352818 TRIP6Q15654 476 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 USP41Q3LFD5 358 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 SGO2Q562F6 1265 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 UBXN11Q5T124 520 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CFAP58Q5T655 872 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 AADACL2Q6P093 401 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 DENND1BQ6P3S1 775 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TTC27Q6P3X3 843 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CCDC137Q6PK04 289 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 ALKAL1Q6UXT8 129 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TMPRSS7Q7RTY8 843 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CYP2U1Q7Z449 544 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CPNE8Q86YQ8 564 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TMC8Q8IU68 726 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 MFSD6LQ8IWD5 586 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 IQCKQ8N0W5 287 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 WDTC1Q8N5D0 677 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 URGCPQ8TCY9 931 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 GRK7Q8WTQ7 553 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 PIGKQ92643 395 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 SMARCD2Q92925 531 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 MAGOHBQ96A72 148 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 MSANTD3Q96H12 275 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 RBM41Q96IZ5 413 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 ZNF560Q96MR9 790 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 RUFY1Q96T51 708 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TXLNGYQ9BZA5 131 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TRIM7Q9C029 511 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 C8orf33Q9H7E9 229 aaPredicted RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 RSAD1Q9HA92 442 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 TRPV4Q9HBA0 871 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 ZDHHC18Q9NUE0 388 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 DDX56Q9NY93 547 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 GTSE1Q9NYZ3 720 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 CACNG4Q9UBN1 327 aa8.56□□□□□ -1.04
CD44-205ENST00000352818 UBQLN1Q9UMX0 589 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 PIN4Q9Y237 131 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
CD44-205ENST00000352818 BOD1L1Q8NFC6 3051 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 TRIP11Q15643 1979 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 CAPN8A6NHC0 703 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 HEPACAM2A8MVW5 462 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 POLR3GO15318 223 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 TLX3O43711 291 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 PPFIA2O75334 1257 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 MICAL2O94851 1124 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 FAM163BP0C2L3 166 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 CD19P15391 556 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 PNPLA4P41247 253 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 KPNA1P52294 538 aaPredicted RBP8.55□□□□□ -1.04
CD44-205ENST00000352818 PTK6Q13882 451 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 CCNG2Q16589 344 aa8.55□□□□□ -1.04
CD44-205ENST00000352818 PTPN20Q4JDL3 420 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms