RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SATL1Q86VE3 508 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 KCNQ5Q9NR82 932 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 UBQLN1Q9UMX0 589 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 CYB561D2O14569 222 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 SIN3BO75182 1162 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 DNAJB2P25686 324 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PON1P27169 355 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 TRIM65Q6PJ69 517 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 SHCBP1Q8NEM2 672 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PSMA8Q8TAA3 256 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 RSAD1Q9HA92 442 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 CASTOR2A6NHX0 329 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ZNF862O60290 1169 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 OXSR1O95747 527 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 STAG3L1P0CL83 205 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ENO3P13929 434 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PLA2G4EQ3MJ16 856 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ANKS6Q68DC2 871 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 LSM14AQ8ND56 463 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ZNF570Q96NI8 536 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 CINPQ9BW66 212 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 SHCBP1LQ9BZQ2 653 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 PSMC3IPQ9P2W1 217 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 FBP2O00757 339 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 GPR182O15218 404 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 OR7A10O76100 309 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ENDOUP21128 410 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 FOLH1Q04609 750 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 MROH9Q5TGP6 573 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 ANKS3Q6ZW76 656 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 SETD3Q86TU7 594 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 DNAAF5Q86Y56 855 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 DAGLBQ8NCG7 672 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 WDR36Q8NI36 951 aaKnown RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 TMEM169Q96HH4 297 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 RPRD1AQ96P16 312 aaPredicted RBP11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 NEUROG2Q9H2A3 272 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 CACNA2D2Q9NY47 1150 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 DIP2BQ9P265 1576 aa11.34□□□□□ -0.59
SMARCE1-202ENST00000348513 BOLA2-SMG1P6H3BVE0 249 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 MYL2P10916 166 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 CDH2P19022 906 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 MAGEA4P43358 317 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 PGDP52209 483 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 LGALS3BPQ08380 585 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 SGF29Q96ES7 293 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 OSMRQ99650 979 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TEX12Q9BXU0 123 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 CCDC177Q9NQR7 707 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 SETD4Q9NVD3 440 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 PAK5Q9P286 719 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TRIM13O60858 407 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 DGKIO75912 1065 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 FGFR2P21802 821 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 DRD4P21917 467 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 POLD3Q15054 466 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF423Q2M1K9 1284 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 DGKKQ5KSL6 1271 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 KIAA0408Q6ZU52 694 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ATG4AQ8WYN0 398 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 FAM136AQ96C01 138 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 COLEC11Q9BWP8 271 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC6A15Q9H2J7 730 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 IL1RL2Q9HB29 575 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 FAM53CQ9NYF3 392 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 SLC39A10Q9ULF5 831 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 MRPL42Q9Y6G3 142 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 A0A087WZ62 844 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 OGTO15294 1046 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 PNPLA4P41247 253 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 CD97P48960 835 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 BLOC1S5Q8TDH9 187 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TFB1MQ8WVM0 346 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 FDXACB1Q9BRP7 624 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 SPRTNQ9H040 489 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TBC1D14Q9P2M4 693 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 USP20Q9Y2K6 914 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 POLBP06746 335 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 MBL2P11226 248 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TCN1P20061 433 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 F8A1P23610 371 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 HALP42357 657 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 GIT2Q14161 759 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ARHGAP15Q53QZ3 475 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms