RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 LHX5Q9H2C1 402 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PRDM16Q9HAZ2 1276 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 TAB2Q9NYJ8 693 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 STIM2Q9P246 746 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 USP36Q9P275 1121 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 EVLQ9UI08 416 aaPredicted RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PILRBQ9UKJ0 227 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 CEP295Q9C0D2 2601 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 PCNX2A6NKB5 2137 aa13.79□□□□□ -0.2
CLCC1-202ENST00000348264 MAP1BP46821 2468 aaKnown RBP13.79□□□□□ -0.2
CLCC1-202ENST00000348264 C4orf47A7E2U8 309 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 TIMM44O43615 452 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 APOEP02649 317 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 KCNA4P22459 653 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 EEF1GP26641 437 aaKnown RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 ZNF33AQ06730 810 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 LMAN2Q12907 356 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 EIF4EBP2Q13542 120 aaPredicted RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 DRAP1Q14919 205 aaPredicted RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 CDKAL1Q5VV42 579 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 RAP1GAP2Q684P5 730 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 TMPRSS6Q8IU80 811 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 DEFB106AQ8N104 65 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 CFAP52Q8N1V2 620 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 DDX50Q9BQ39 737 aaKnown RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 NAA15Q9BXJ9 866 aaKnown RBP13.78□□□□□ -0.2
CLCC1-202ENST00000348264 TMEM245Q9H330 911 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 FAM204AQ9H8W3 233 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 ASNSD1Q9NWL6 643 aa13.78□□□□□ -0.2
CLCC1-202ENST00000348264 SYNJ2BP-COX16A0A087WUM0 186 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 FAM170AA1A519 330 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 TYW5A2RUC4 315 aaKnown RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 CDX4O14627 284 aaPredicted RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 HSF2BPO75031 334 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 GLI1P08151 1106 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 DLDP09622 509 aaKnown RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 UCHL3P15374 230 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 TACR2P21452 398 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 CD6P30203 668 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 HOXD12P35452 270 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 KRT9P35527 623 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 TPMTP51580 245 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 CAMK2GQ13555 558 aaPredicted RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 E2F5Q15329 346 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 FSCBQ5H9T9 825 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 OR6B2Q6IFH4 312 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 MMS22LQ6ZRQ5 1243 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 C11orf57Q6ZUT1 292 aaPredicted RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 CHSY1Q86X52 802 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 LGI2Q8N0V4 545 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 CARNMT1Q8N4J0 409 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 FIBINQ8TAL6 211 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 SIPA1Q96FS4 1042 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 TOE1Q96GM8 510 aaKnown RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 BTN2A3PQ96KV6 586 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 NOX5Q96PH1 765 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 TMEM9BQ9NQ34 198 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 FSCN3Q9NQT6 498 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 COX16Q9P0S2 106 aa13.77□□□□□ -0.21
CLCC1-202ENST00000348264 INTS6Q9UL03 887 aaKnown RBP13.77□□□□□ -0.21
CLCC1-202ENST00000348264 CABIN1Q9Y6J0 2220 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 F8VZ95 297 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 NDUFS2O75306 463 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 DAB1O75553 588 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 LUC7L3O95232 432 aaKnown RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 CFIP05156 583 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 ADRB1P08588 477 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 CYP11B1P15538 503 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 CSKP41240 450 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 DPP6P42658 865 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 KLK7P49862 253 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 CDK17Q00537 523 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 CDH18Q13634 790 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 KRT31Q15323 416 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 EFHC1Q5JVL4 640 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 OTUD1Q5VV17 481 aaPredicted RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 SLC23A3Q6PIS1 610 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 SLC26A9Q7LBE3 791 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 CIR1Q86X95 450 aaPredicted RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 ZNF557Q8N988 423 aaPredicted RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 OR2T3Q8NH03 318 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 DDX1Q92499 740 aaKnown RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 PRCCQ92733 491 aaPredicted RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 MYO19Q96H55 970 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 PRMT1Q99873 361 aaKnown RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
CLCC1-202ENST00000348264 ADAM33Q9BZ11 813 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 GANQ9H2C0 597 aa13.76□□□□□ -0.21
CLCC1-202ENST00000348264 MTG2Q9H4K7 406 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms