RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PDHA1P08559 390 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SBK3P0C264 359 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 EZRP15311 586 aaKnown RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 TGM2P21980 687 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 CLNS1AP54105 237 aaKnown RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 LILRA4P59901 499 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 AP1B1Q10567 949 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 ZBTB17Q13105 803 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 FOXB2Q5VYV0 432 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 WSCD1Q658N2 575 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PPP1R2P3Q6NXS1 205 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 CLEC20AQ6ZU45 233 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 TMEM151AQ8N4L1 468 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 ANKRD52Q8NB46 1076 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 TEKT4Q8WW24 435 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 HTR3CQ8WXA8 447 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 MFSD3Q96ES6 412 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 TMEM209Q96SK2 561 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 ZNF670Q9BS34 389 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PHACTR1Q9C0D0 580 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PRDM12Q9H4Q4 367 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PIDD1Q9HB75 910 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 WDR6Q9NNW5 1121 aaKnown RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 TXLNGQ9NUQ3 528 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 NDFIP2Q9NV92 336 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 NMRK1Q9NWW6 199 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 NOP53Q9NZM5 478 aaKnown RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 IQANK1A0A1B0GTG1 560 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 MYBPHLA2RUH7 354 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 H3BRJ5 948 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 RNF103O00237 685 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 DCTN3O75935 186 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 ALDH1A2O94788 518 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 LTFP02788 710 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 JUNP05412 331 aaKnown RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SNRPAP09012 282 aaKnown RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 C6orf222P0C671 652 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 GBP2P32456 591 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 MAP3K7CLP57077 242 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SLC25A3Q00325 362 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PDE1BQ01064 536 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 USP4Q13107 963 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SEMA5AQ13591 1074 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 IHHQ14623 411 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SETDB1Q15047 1291 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PDK2Q15119 407 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 FAM47CQ5HY64 1035 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 CERCAMQ5T4B2 595 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 ZNF280DQ6N043 979 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 EP400NLQ6ZTU2 488 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SLC26A9Q7LBE3 791 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 MFSD6LQ8IWD5 586 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 CRYBG2Q8N1P7 616 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PHTF2Q8N3S3 785 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 SPATA6LQ8N4H0 392 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 MAB21L3Q8N8X9 362 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 GPRC5AQ8NFJ5 357 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 AGR3Q8TD06 166 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 NT5C3BQ969T7 300 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 EMID1Q96A84 441 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 FAM136AQ96C01 138 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 PGBD4Q96DM1 585 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 NSL1Q96IY1 281 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 MLPHQ9BV36 600 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-201ENST00000347613 TRIM55Q9BYV6 548 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 XPNPEP3Q9NQH7 507 aa6.22□□□□□ -1.41
CLCN3-201ENST00000347613 DPPA5A6NC42 116 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SDR42E2A6NKP2 422 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SMAPO00193 183 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SMNDC1O75940 238 aaKnown RBP eCLIP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 HAUS5O94927 633 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 HOXD8P13378 290 aaPredicted RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 CTGFP29279 349 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 TMPRSS15P98073 1019 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 CAP1Q01518 475 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 TNFAIP2Q03169 654 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 ZNF460Q14592 562 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 NAA25Q14CX7 972 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 RCN1Q15293 331 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 DUSP28Q4G0W2 176 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PAN2Q504Q3 1202 aaKnown RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 FASTKD1Q53R41 847 aaKnown RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 FBXO47Q5MNV8 452 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 RABGAP1LQ5R372 815 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 N4BP2L1Q5TBK1 243 aaPredicted RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 ARHGAP17Q68EM7 881 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 DPY19L2Q6NUT2 758 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SLC27A1Q6PCB7 646 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PACS1Q6VY07 963 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 CATSPER4Q7RTX7 472 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 OR6J1Q8NGC5 347 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 GSDMBQ8TAX9 411 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 EDEM1Q92611 657 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 DPF3Q92784 378 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 E2F7Q96AV8 911 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 PPP1R36Q96LQ0 422 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SMOQ99835 787 aa6.21□□□□□ -1.41
CLCN3-201ENST00000347613 DDX50Q9BQ39 737 aaKnown RBP6.21□□□□□ -1.41
CLCN3-201ENST00000347613 SYT17Q9BSW7 474 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms