RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PRAMEP78395 509 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 N4BP2L1Q5TBK1 243 aaPredicted RBP13.68□□□□□ -0.22
CASC4-202ENST00000345795 CST9Q5W186 159 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 SMC1BQ8NDV3 1235 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 OR6K2Q8NGY2 324 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 WNT8BQ93098 351 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 E2F7Q96AV8 911 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 PHF21BQ96EK2 531 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 ITGAVP06756 1048 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 SLC10A2Q12908 348 aaPredicted RBP13.68□□□□□ -0.22
CASC4-202ENST00000345795 PDK1Q15118 436 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 CCDC97Q96F63 343 aaPredicted RBP13.68□□□□□ -0.22
CASC4-202ENST00000345795 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 ABCG8Q9H221 673 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 POPDC2Q9HBU9 364 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 CRYL1Q9Y2S2 319 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 CCDC160A6NGH7 325 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 SLC15A5A6NIM6 579 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 MTA2O94776 668 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 SERPINB4P48594 390 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 COPS2P61201 443 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 STX3Q13277 289 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
CASC4-202ENST00000345795 HDAC11Q96DB2 347 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 NUDCD1Q96RS6 583 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 C3orf70A6NLC5 250 aaPredicted RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 B2RBV5 119 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 GPR182O15218 404 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 SHOX2O60902 331 aaPredicted RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 PRKCGP05129 697 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 CSH1P0DML2 217 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 CSH2P0DML3 217 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ODC1P11926 461 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 MRPS5P82675 430 aaKnown RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 UNC5AQ6ZN44 842 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 SLC26A11Q86WA9 606 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 CACUL1Q86Y37 369 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 FBXO32Q969P5 355 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ELMO2Q96JJ3 720 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 TMEM120AQ9BXJ8 343 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 SENP6Q9GZR1 1112 aaPredicted RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 IL1RL2Q9HB29 575 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 CLUHO75153 1309 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 TPP1O14773 563 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ZBTB24O43167 697 aaPredicted RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 KLRC2P26717 231 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ASPHQ12797 758 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 STILQ15468 1287 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 PSMD5Q16401 504 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 OLFML1Q6UWY5 402 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 OTOAQ7RTW8 1153 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 C3orf58Q8NDZ4 430 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 SREK1Q8WXA9 508 aaKnown RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 TLCD1Q96CP7 247 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ARHGEF4Q9NR80 690 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 DNAJC16Q9Y2G8 782 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 WNK3Q9BYP7 1800 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 AIM2O14862 343 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ENTPD5O75356 428 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 MATKP42679 507 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 TWF1Q12792 350 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 USP4Q13107 963 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 PDK2Q15119 407 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 RAP1GAP2Q684P5 730 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 RFWD3Q6PCD5 774 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
CASC4-202ENST00000345795 TRIB2Q92519 343 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 TRPV2Q9Y5S1 764 aa13.67□□□□□ -0.22
CASC4-202ENST00000345795 SSC5DA1L4H1 1573 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 EME2A4GXA9 379 aaPredicted RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 TBKBP1A7MCY6 615 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 POLBP06746 335 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 KRT16P08779 473 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 TAC1P20366 129 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 MAP2K2P36507 400 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 PNPLA4P41247 253 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 NR1H3Q13133 447 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 OASLQ15646 514 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 CYP1B1Q16678 543 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ACCSLQ4AC99 568 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ARHGAP36Q6ZRI8 547 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 RNF180Q86T96 592 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 SPATS2Q86XZ4 545 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 SLC35B2Q8TB61 432 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 CKAP2Q8WWK9 683 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 LHX5Q9H2C1 402 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 AFF4Q9UHB7 1163 aaKnown RBP13.66□□□□□ -0.22
CASC4-202ENST00000345795 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 TTC3P53804 2025 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 NUP205Q92621 2012 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 IGKV6-21A0A0C4DH24 114 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 SDR42E2A6NKP2 422 aa13.66□□□□□ -0.22
CASC4-202ENST00000345795 ITGB6P18564 788 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms