RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TLDC2A0PJX2 215 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 GOLGA8MH3BSY2 632 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 H7C0C1 242 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 ENPP3O14638 875 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 PQBP1O60828 265 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 FBXO21O94952 628 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 OR4Q2P0C623 313 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NEFHP12036 1026 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 NR1D1P20393 614 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 OR1G1P47890 313 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 ATP5OP48047 213 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 CTCFP49711 727 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 BCAR1P56945 870 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 ROR1Q01973 937 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 GAD2Q05329 585 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 HP1BP3Q5SSJ5 553 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 BHLHA9Q7RTU4 235 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 BNIPLQ7Z465 357 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 BTLAQ7Z6A9 289 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 C10orf67Q8IYJ2 551 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 CCDC33Q8N5R6 958 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 URGCPQ8TCY9 931 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 PRCCQ92733 491 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 C9orf72Q96LT7 481 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 RBM15Q96T37 977 aaKnown RBP eCLIP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 PAIP2Q9BPZ3 127 aaKnown RBP9.56□□□□□ -0.88
ATG4A-202ENST00000345734 CSNK1G1Q9HCP0 422 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 SAGE1Q9NXZ1 904 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 FZD10Q9ULW2 581 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 PATJQ8NI35 1801 aa9.56□□□□□ -0.88
ATG4A-202ENST00000345734 TCRBV7S3A2A0A539 114 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 CAPN9O14815 690 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TTC4O95801 387 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 ZBED1O96006 694 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 AMHP03971 560 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 GOT1P17174 413 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TYMPP19971 482 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TGM2P21980 687 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 AMPD1P23109 780 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 SLCO1A2P46721 670 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 GBE1Q04446 702 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 RNASELQ05823 741 aaKnown RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 SLC10A2Q12908 348 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 MORF4L2Q15014 288 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 AGBL2Q5U5Z8 902 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 THEM5Q8N1Q8 247 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 SLC7A14Q8TBB6 771 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 CPT1BQ92523 772 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 CSPG4P5Q96PW8 444 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 FTHL17Q9BXU8 183 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 RUBCNLQ9H714 662 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 USP29Q9HBJ7 922 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 SAYSD1Q9NPB0 183 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TIMMDC1Q9NPL8 285 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PAK6Q9NQU5 681 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 CNGB3Q9NQW8 809 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PIGVQ9NUD9 493 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 ETNK2Q9NVF9 386 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 ZDHHC3Q9NYG2 299 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 STAP1Q9ULZ2 295 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 NUP205Q92621 2012 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 SCAMP3O14828 347 aaKnown RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 BANF1O75531 89 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 NCAM1P13591 858 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 RBL1P28749 1068 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 GRNP28799 593 aaKnown RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 RDXP35241 583 aaKnown RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 MAGEA4P43358 317 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 MAGOHP61326 146 aaKnown RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PRR20EP86478 221 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PRR20CP86479 221 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PRR20DP86480 221 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PRR20BP86481 221 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PRR20AP86496 221 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TSPY1Q01534 308 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 YWHAHQ04917 246 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 DEUP1Q05D60 604 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 BFSP2Q13515 415 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 FASTKD3Q14CZ7 662 aaKnown RBP9.55□□□□□ -0.88
ATG4A-202ENST00000345734 PLEKHG4Q58EX7 1191 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 KDM7AQ6ZMT4 941 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 HOOK3Q86VS8 718 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 VSIG1Q86XK7 387 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 NETO2Q8NC67 525 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 SCAMP5Q8TAC9 235 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 NEUROD4Q9HD90 331 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 ANLNQ9NQW6 1124 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 TMEM161AQ9NX61 479 aa9.55□□□□□ -0.88
ATG4A-202ENST00000345734 MYO16Q9Y6X6 1858 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 ZNF487B1APH4 448 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 I6L893 689 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 KCNN4O15554 427 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 TNFRSF21O75509 655 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 LTFP02788 710 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 IFI35P80217 286 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 IFRD2Q12894 506 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-202ENST00000345734 LONRF1Q17RB8 773 aa9.54□□□□□ -0.88
ATG4A-202ENST00000345734 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms