RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 FAM217AQ8IXS0 508 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 HJURPQ8NCD3 748 aaPredicted RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 WBP2Q969T9 261 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 CALR3Q96L12 384 aaKnown RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 C1orf74Q96LT6 269 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 P2RY13Q9BPV8 354 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 OSBPL6Q9BZF3 934 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 DEC1Q9P2X7 70 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 ANAPC7Q9UJX3 599 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 NENFQ9UMX5 172 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 PCDHA13Q9Y5I0 950 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 HELZP42694 1942 aaKnown RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 KRBA1A5PL33 1030 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 SOWAHDA6NJG2 315 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 TRDMT1O14717 391 aaKnown RBP12.25□□□□□ -0.45
SNCA-202ENST00000345009 PRPSAP2O60256 369 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 PAGE1O75459 146 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
SNCA-202ENST00000345009 DRD1P21728 446 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 ADRA1BP35368 520 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 LRRC32Q14392 662 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 UBXN2BQ14CS0 331 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 DGKKQ5KSL6 1271 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 PIK3R6Q5UE93 754 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 BNIPLQ7Z465 357 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 BMP8AQ7Z5Y6 402 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 SLFN11Q7Z7L1 901 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 CHSY1Q86X52 802 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 FAM131BQ86XD5 332 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 DNAAF5Q86Y56 855 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 FLCNQ8NFG4 579 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 ZNF564Q8TBZ8 553 aaPredicted RBP12.25□□□□□ -0.45
SNCA-202ENST00000345009 CD101Q93033 1021 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 PNKPQ96T60 521 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 SLC2A11Q9BYW1 496 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 SIK2Q9H0K1 926 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 EPHX3Q9H6B9 360 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 ARHGEF38Q9NXL2 777 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 SIT1Q9Y3P8 196 aa12.25□□□□□ -0.45
SNCA-202ENST00000345009 OTOL1A6NHN0 477 aaPredicted RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 FAM170BA6NMN3 283 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 ARHGAP6O43182 974 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 CCP110O43303 1012 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 TSPAN3O60637 253 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 TECTAO75443 2155 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 PENKP01210 267 aaPredicted RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 APODP05090 189 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 TFE3P19532 575 aaPredicted RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 TACR2P21452 398 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 PCK1P35558 622 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 GRIA2P42262 883 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 ARHGAP25P42331 645 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 NOP2P46087 812 aaKnown RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 CLCN5P51795 746 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 OXCT1P55809 520 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 HDAC4P56524 1084 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 AUHQ13825 339 aaKnown RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 HADHQ16836 314 aaKnown RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 FBXO43Q4G163 708 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 BOLA3Q53S33 107 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 FAM133BQ5BKY9 247 aaKnown RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 MS4A13Q5J8X5 152 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 EFHC2Q5JST6 749 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 GRAMD4Q6IC98 578 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 TRNP1Q6NT89 227 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 KIAA1328Q86T90 577 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 LGI2Q8N0V4 545 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 SYNPOQ8N3V7 929 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 SLC35G2Q8TBE7 412 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 RFFLQ8WZ73 363 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 NTAN1Q96AB6 310 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 RETREG1Q9H6L5 497 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 ARHGEF4Q9NR80 690 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 DNAJC17Q9NVM6 304 aaKnown RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 DONSONQ9NYP3 566 aa12.24□□□□□ -0.45
SNCA-202ENST00000345009 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
SNCA-202ENST00000345009 GOLGA6L7A0A1B0GV03 622 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 TBC1D3BA6NDS4 549 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 CACNG3O60359 315 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 GPR37L1O60883 481 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 TBL1XO60907 577 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 TULP3O75386 442 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 SSR1P43307 286 aaKnown RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 MAGEA9P43362 315 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 SOX9P48436 509 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 DGKGP49619 791 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 GALK1P51570 392 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 VCPP55072 806 aaKnown RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 SCAPQ12770 1279 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 KIF5AQ12840 1032 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 PON2Q15165 354 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 IFI16Q16666 785 aaKnown RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 SH3PXD2AQ5TCZ1 1133 aa12.23□□□□□ -0.45
SNCA-202ENST00000345009 OTUD1Q5VV17 481 aaPredicted RBP12.23□□□□□ -0.45
SNCA-202ENST00000345009 RAP1GAP2Q684P5 730 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms