RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 YAF2Q8IY57 180 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 EMC1Q8N766 993 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 SEC14L1Q92503 715 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 MAGOHBQ96A72 148 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 SLITRK1Q96PX8 696 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 OSBPL8Q9BZF1 889 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 ACBD3Q9H3P7 528 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 LRRC19Q9H756 370 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM114A2Q9NRY5 505 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 AMACRQ9UHK6 382 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 UTP11Q9Y3A2 253 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 YIPF1Q9Y548 306 aa14.01□□□□□ -0.17
HERPUD1-202ENST00000344114 MAP2K7O14733 419 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 TTI1O43156 1089 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 PAPSS1O43252 624 aaPredicted RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 RRP9O43818 475 aaKnown RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 ZNF806P0C7X5 589 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM200BP0CF97 657 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 MYBL2P10244 700 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 RARAP10276 462 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 ACAT1P24752 427 aaKnown RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 COILP38432 576 aaPredicted RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 KPNA1P52294 538 aaPredicted RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 MRPS25P82663 173 aaKnown RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 KLF1Q13351 362 aaPredicted RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 CCINQ13939 588 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 AASDHQ4L235 1098 aaPredicted RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 ZFYVE27Q5T4F4 411 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 HEATR6Q6AI08 1181 aaKnown RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
HERPUD1-202ENST00000344114 CEP68Q76N32 757 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 FAM35AQ86V20 835 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 SYNPOQ8N3V7 929 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 GRK7Q8WTQ7 553 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 RXFP2Q8WXD0 754 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 CASKIN2Q8WXE0 1202 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 KCTD13Q8WZ19 329 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 SLCO2A1Q92959 643 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 CAVIN3Q969G5 261 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 LOXL4Q96JB6 756 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 LPIN3Q9BQK8 851 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 ACBD6Q9BR61 282 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 MED10Q9BTT4 135 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 CRTAC1Q9NQ79 661 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 SHROOM3Q8TF72 1996 aa14□□□□□ -0.17
HERPUD1-202ENST00000344114 A0A1W2PRU2 124 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 TCRBV7S2A1N4TA0A589 114 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 ZSCAN5CA6NGD5 496 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 ATP2C2O75185 946 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 EPN2O95208 641 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 RALAP11233 206 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 CPB1P15086 417 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 TCF4P15884 667 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 PDGFRAP16234 1089 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 HOXC13P31276 330 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 SDC4P31431 198 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 GBP1P32455 592 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 PTPN9P43378 593 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 TNNT3P45378 269 aaPredicted RBP13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 PLD1Q13393 1074 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 SF3A2Q15428 464 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 EFHC1Q5JVL4 640 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 SPOCD1Q6ZMY3 1216 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 JAMLQ86YT9 394 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 GSPT2Q8IYD1 628 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 MYCBPAPQ8TBZ2 947 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 PIWIL1Q96J94 861 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 LRRC3BQ96PB8 259 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 ARRDC1-AS1Q9H2J1 176 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 VIPAS39Q9H9C1 493 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 KRT82Q9NSB4 513 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 OBP2AQ9NY56 170 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 EFR3BQ9Y2G0 817 aa13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
HERPUD1-202ENST00000344114 DENND4CQ5VZ89 1909 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 DOCK4Q8N1I0 1966 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 hCG_1818297A0A087WSY0 165 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 CCDC163A0A0D9SF12 145 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 LRRD1A4D1F6 860 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 PIK3R2O00459 728 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 AXIN1O15169 862 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 GABBR2O75899 941 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 FBXO21O94952 628 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 TJP3O95049 919 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 TRUB2O95900 331 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 FLT3P36888 993 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 PTGIRP43119 386 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 CARSP49589 748 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 CASP8Q14790 479 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 PON2Q15165 354 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 MAPRE1Q15691 268 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 INTS6LQ5JSJ4 861 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 STXBP5Q5T5C0 1151 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 OVOS1Q6IE37 1185 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 TRNP1Q6NT89 227 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 MFSD7Q6UXD7 560 aa13.98□□□□□ -0.17
HERPUD1-202ENST00000344114 CLEC20AQ6ZU45 233 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms