RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 NUGGCQ68CJ6 796 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 LPCAT2Q7L5N7 544 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 PGBD3Q8N328 593 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 FRMD1Q8N878 549 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 MSANTD4Q8NCY6 345 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 AZIN2Q96A70 460 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 SYT11Q9BT88 431 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 DNAJC17Q9NVM6 304 aaKnown RBP18.71■□□□□ 0.59
USF2-202ENST00000343550 STARD13Q9Y3M8 1113 aa18.71■□□□□ 0.59
USF2-202ENST00000343550 CNOT1A5YKK6 2376 aaKnown RBP18.71■□□□□ 0.59
USF2-202ENST00000343550 PATE3B3GLJ2 98 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 KCNK5O95279 499 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 LATS1O95835 1130 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 NOS2P35228 1153 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 RNASE9P60153 205 aaKnown RBP18.7■□□□□ 0.58
USF2-202ENST00000343550 CDK17Q00537 523 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 MAP7D1Q3KQU3 841 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 GRAMD4Q6IC98 578 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 MMS22LQ6ZRQ5 1243 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 PIGKQ92643 395 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 XPO6Q96QU8 1125 aaKnown RBP18.7■□□□□ 0.58
USF2-202ENST00000343550 PLK2Q9NYY3 685 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 MBD1Q9UIS9 605 aaPredicted RBP18.7■□□□□ 0.58
USF2-202ENST00000343550 HCN2Q9UL51 889 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 ACACBO00763 2458 aa18.7■□□□□ 0.58
USF2-202ENST00000343550 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 A0A1W2PQJ5 194 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 GFRA2O00451 464 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 IRAK2O43187 625 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 CACNG3O60359 315 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PENKP01210 267 aaPredicted RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 MATKP42679 507 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 IRX4P78413 519 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 CENPCQ03188 943 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PTP4A2Q12974 167 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 FAM102AQ5T9C2 384 aaPredicted RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 DAB2IPQ5VWQ8 1189 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 FYB2Q5VWT5 728 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 E4F1Q66K89 784 aaPredicted RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 TMEFF1Q8IYR6 380 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 BHMTQ93088 406 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 SEPT11Q9NVA2 429 aaKnown RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 TMEM59LQ9UK28 342 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 FBXO10Q9UK96 956 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 ANGPTL2Q9UKU9 493 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 CAPN11Q9UMQ6 739 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 ACSL4O60488 711 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 DAB1O75553 588 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 TPM3P06753 285 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 CISD3P0C7P0 127 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 TNFAIP3P21580 790 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PMLP29590 882 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 NTSR1P30989 418 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PRKCIP41743 596 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PTGER3P43115 390 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 NSFP46459 744 aaKnown RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 SLC11A2P49281 568 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 ASIC2Q16515 512 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 ZC3H12AQ5D1E8 599 aaKnown RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 SPDYCQ5MJ68 293 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PSAPL1Q6NUJ1 521 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 PHF13Q86YI8 300 aaPredicted RBP18.69■□□□□ 0.58
USF2-202ENST00000343550 CPLX3Q8WVH0 158 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 NT5C3BQ969T7 300 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 IQCDQ96DY2 449 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 NPY6RQ99463 290 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 HAUS4Q9H6D7 363 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 TMEM9BQ9NQ34 198 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.69■□□□□ 0.58
USF2-202ENST00000343550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.58
USF2-202ENST00000343550 THADAQ6YHU6 1953 aa18.69■□□□□ 0.58
USF2-202ENST00000343550 GOLGA6L7A0A1B0GV03 622 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 GOLGA8SH3BPF8 625 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 CDX4O14627 284 aaPredicted RBP18.68■□□□□ 0.58
USF2-202ENST00000343550 CBFA2T2O43439 604 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 TSPAN3O60637 253 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 HOXB2P14652 356 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 WASP42768 502 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 MPPE1Q53F39 396 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 FAM133BQ5BKY9 247 aaKnown RBP18.68■□□□□ 0.58
USF2-202ENST00000343550 EGFLAMQ63HQ2 1017 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 SDE2Q6IQ49 451 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 ARMCX6Q7L4S7 300 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 ARCQ7LC44 396 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 ZNF571Q7Z3V5 609 aaPredicted RBP18.68■□□□□ 0.58
USF2-202ENST00000343550 PHLDB2Q86SQ0 1253 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 DDI1Q8WTU0 396 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 TMA16Q96EY4 203 aaKnown RBP18.68■□□□□ 0.58
USF2-202ENST00000343550 C11orf70Q9BRQ4 267 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 NUCKS1Q9H1E3 243 aaKnown RBP18.68■□□□□ 0.58
USF2-202ENST00000343550 DDIT4Q9NX09 232 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 RRN3Q9NYV6 651 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 ADAM22Q9P0K1 906 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 CALCOCO1Q9P1Z2 691 aa18.68■□□□□ 0.58
USF2-202ENST00000343550 NUP205Q92621 2012 aa18.67■□□□□ 0.58
USF2-202ENST00000343550 EPG5Q9HCE0 2579 aa18.67■□□□□ 0.58
USF2-202ENST00000343550 A0A1W2PQF6 199 aa18.67■□□□□ 0.58
USF2-202ENST00000343550 KCNU1A8MYU2 1149 aa18.67■□□□□ 0.58
USF2-202ENST00000343550 CYBBP04839 570 aa18.67■□□□□ 0.58
USF2-202ENST00000343550 SKILP12757 684 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms