RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 FAM98CQ17RN3 349 aaKnown RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 ZNF354BQ96LW1 612 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 TMEM51Q9NW97 253 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 DHRS7Q9Y394 339 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 NTSP30990 170 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 STARD3Q14849 445 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 PDPK2PQ6A1A2 396 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 WDR19Q8NEZ3 1342 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 CLOCKO15516 846 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 NUAK1O60285 661 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 BPNT1O95861 308 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 A1BGP04217 495 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 RLN1P04808 185 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 FAM187BQ17R55 369 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 NUDT12Q9BQG2 462 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 EPB41L1Q9H4G0 881 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 DPP7Q9UHL4 492 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 NDUFAF1Q9Y375 327 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 NR1D2Q14995 579 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 PAGE2BQ5JRK9 111 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 FNDC5Q8NAU1 212 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 PHTF1Q9UMS5 762 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 ARL5CA6NH57 179 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 CYB5AP00167 134 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 OGNP20774 298 aaKnown RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 EIF5AP63241 154 aaKnown RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 GUF1Q8N442 669 aaKnown RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 HDDC3Q8N4P3 179 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 FATE1Q969F0 183 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 TBATAQ96M53 351 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 VCPKMTQ9H867 229 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 UBQLN1Q9UMX0 589 aaKnown RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 E2F8A0AVK6 867 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 MTA2O94776 668 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 BMP7P18075 431 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 HALP42357 657 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 USP11P51784 963 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 C10orf107Q8IVU9 208 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 DNAJA4Q8WW22 397 aaPredicted RBP17.99■□□□□ 0.47
SMAD4-201ENST00000342988 KCNB2Q92953 911 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 UBE2E3Q969T4 207 aa17.99■□□□□ 0.47
SMAD4-201ENST00000342988 PEX6Q13608 980 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 MGAT5BQ3V5L5 792 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 AMIGO1Q86WK6 493 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 HPS1Q92902 700 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 KCNS3Q9BQ31 491 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 OSBPL5Q9H0X9 879 aaPredicted RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 GPR108Q9NPR9 543 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 DDX18Q9NVP1 670 aaKnown RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 LIMD1Q9UGP4 676 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 STOMP27105 288 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 CDK8P49336 464 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 PLCZ1Q86YW0 608 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 TDRD1Q9BXT4 1180 aaKnown RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 PMPCBO75439 489 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 HKDC1Q2TB90 917 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 SWSAP1Q6NVH7 229 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 ZNF518AQ6AHZ1 1483 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 CES2O00748 559 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 SNAP91O60641 907 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 CYP17A1P05093 508 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 AGKQ53H12 422 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 BROXQ5VW32 411 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 CLVS1Q8IUQ0 354 aaPredicted RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 ERMAPQ96PL5 475 aaPredicted RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 A0A0G2JPF8 293 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 HNRNPCL3B7ZW38 293 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 UBDO15205 165 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 NCK2O43639 380 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 PRLP01236 227 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 HNRNPCL4P0DMR1 293 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 XIAPP98170 497 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 STK4Q13043 487 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 PAPD7Q5XG87 772 aaKnown RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 MS4A14Q96JA4 679 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 FRG1Q14331 258 aaKnown RBP17.98■□□□□ 0.47
SMAD4-201ENST00000342988 USP21Q9UK80 565 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 TRIM64BA6NI03 449 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 H3BNH8 94 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 RAP1GAPP47736 663 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 SCTRP47872 440 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 CPA2P48052 419 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 UTS2BQ765I0 119 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 OR5T3Q8NGG3 340 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 GPER1Q99527 375 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 SEPHS2Q99611 448 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 PHF20Q9BVI0 1012 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 DMTF1Q9Y222 760 aa17.98■□□□□ 0.47
SMAD4-201ENST00000342988 NOTUMQ6P988 496 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 EIF2AK1Q9BQI3 630 aaKnown RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 RUSC1Q9BVN2 902 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 IFNGP01579 166 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 HMBSP08397 361 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 ADSLP30566 484 aaPredicted RBP17.97■□□□□ 0.47
SMAD4-201ENST00000342988 CDKL1Q00532 357 aa17.97■□□□□ 0.47
SMAD4-201ENST00000342988 SGCGQ13326 291 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms