RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 PRAMEF12O95522 483 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 ARL4AP40617 200 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 VPS41P49754 854 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 COPS2P61201 443 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 ALFQ53S48 1182 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 PDE12Q6L8Q7 609 aaKnown RBP14.34□□□□□ -0.11
PMS1-201ENST00000342075 C8orf74Q6P047 294 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 DDX42Q86XP3 938 aaKnown RBP eCLIP14.34□□□□□ -0.11
PMS1-201ENST00000342075 MAP7D3Q8IWC1 876 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 DEPDC1BQ8WUY9 529 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 MRPS31Q92665 395 aaKnown RBP14.34□□□□□ -0.11
PMS1-201ENST00000342075 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
PMS1-201ENST00000342075 E9PAM4 449 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 APOL1O14791 398 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 DAPK3O43293 454 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 ZSCAN5DPP0CG00 497 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 PTPN2P17706 415 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 PTPN7P35236 360 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 COILP38432 576 aaPredicted RBP14.34□□□□□ -0.11
PMS1-201ENST00000342075 AUHQ13825 339 aaKnown RBP14.34□□□□□ -0.11
PMS1-201ENST00000342075 CLUL1Q15846 466 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 FAM133BQ5BKY9 247 aaKnown RBP14.34□□□□□ -0.11
PMS1-201ENST00000342075 BRMS1LQ5PSV4 323 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 SLC9A4Q6AI14 798 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 MMGT1Q8N4V1 131 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 PIDD1Q9HB75 910 aa14.34□□□□□ -0.11
PMS1-201ENST00000342075 LIASO43766 372 aa14.33□□□□□ -0.11
PMS1-201ENST00000342075 TSPAN3O60637 253 aa14.33□□□□□ -0.11
PMS1-201ENST00000342075 APOEP02649 317 aa14.33□□□□□ -0.11
PMS1-201ENST00000342075 FBXL22Q6P050 247 aa14.33□□□□□ -0.11
PMS1-201ENST00000342075 CCDC105Q8IYK2 499 aa14.33□□□□□ -0.11
PMS1-201ENST00000342075 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.11
PMS1-201ENST00000342075 GOLGA6L10A0A0M3HER8 536 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 TUBP50607 506 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 PRSS36Q5K4E3 855 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 ZBTB9Q96C00 473 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 CEP41Q9BYV8 373 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
PMS1-201ENST00000342075 DCLK1O15075 740 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 GREM1O60565 184 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 OLFM2O95897 454 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 IGFBP4P22692 258 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 PTGIRP43119 386 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 MLLT6P55198 1093 aaPredicted RBP14.33□□□□□ -0.12
PMS1-201ENST00000342075 MANEALQ5VSG8 457 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 CHSY1Q86X52 802 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 ZNF683Q8IZ20 524 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 PRICKLE1Q96MT3 831 aaPredicted RBP14.33□□□□□ -0.12
PMS1-201ENST00000342075 LGMNQ99538 433 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 NCAPGQ9BPX3 1015 aa14.33□□□□□ -0.12
PMS1-201ENST00000342075 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 HELZP42694 1942 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 H3BRJ5 948 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 APOC4-APOC2K7ER74 178 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 HEXIM1O94992 359 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 APOC2P02655 101 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 MYBL2P10244 700 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 CETN2P41208 172 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 RPS24P62847 133 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 CYP1B1Q16678 543 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 SYCE2Q6PIF2 218 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 ARHGAP36Q6ZRI8 547 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 P3H4Q92791 437 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 BTN2A3PQ96KV6 586 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 HAPLN3Q96S86 360 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 PRMT1Q99873 361 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 LMAN2LQ9H0V9 348 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 DPH5Q9H2P9 285 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 NSUN3Q9H649 340 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 CFAP97Q9P2B7 532 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 F5H423 210 aaPredicted RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 XYLBO75191 536 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 TBX10O75333 385 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 SP100P23497 879 aaPredicted RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 CDC25CP30307 473 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 EPHA5P54756 1037 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 DR1Q01658 176 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 ITIH3Q06033 890 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 BYSLQ13895 437 aaKnown RBP14.32□□□□□ -0.12
PMS1-201ENST00000342075 SYCP2LQ5T4T6 812 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 UNC45BQ8IWX7 931 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 LRRC19Q9H756 370 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 ZDHHC7Q9NXF8 308 aa14.32□□□□□ -0.12
PMS1-201ENST00000342075 DOCK8Q8NF50 2099 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 CCDC188H7C350 402 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 EIF3EP60228 445 aaKnown RBP14.31□□□□□ -0.12
PMS1-201ENST00000342075 VSNL1P62760 191 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 GUCY2DQ02846 1103 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 KLHDC10Q6PID8 442 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 Q7L0L9 218 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 JAMLQ86YT9 394 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
PMS1-201ENST00000342075 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 GCNAQ96QF7 691 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 EPAS1Q99814 870 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 OSBPL2Q9H1P3 480 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 CLEC1BQ9P126 229 aa14.31□□□□□ -0.12
PMS1-201ENST00000342075 ZNF148Q9UQR1 794 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms