RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PNMA6AP0CW24 399 aaPredicted RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 PABPC1P11940 636 aaKnown RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 ZNF18P17022 549 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 NDUFV2P19404 249 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 ABCB4P21439 1286 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 SLC6A4P31645 630 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 NOS2P35228 1153 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 HOXD12P35452 270 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 WASP42768 502 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 LIMK1P53667 647 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 ZNF234Q14588 700 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 RSPO4Q2I0M5 234 aaPredicted RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 MS4A13Q5J8X5 152 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 ACBD5Q5T8D3 534 aaPredicted RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 RFWD3Q6PCD5 774 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 METTL3Q86U44 580 aaKnown RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 MFN1Q8IWA4 741 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 DEFB106AQ8N104 65 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 FIBINQ8TAL6 211 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 C18orf8Q96DM3 657 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 SPAG5Q96R06 1193 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 RTKNQ9BST9 563 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 FBRSQ9HAH7 460 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 ABCB8Q9NUT2 735 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 TMEM63CQ9P1W3 806 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 STAP1Q9ULZ2 295 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 PAXBP1Q9Y5B6 917 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 CEP250Q9BV73 2442 aa13.82□□□□□ -0.2
SIRPB3P-201ENST00000340424 GOLGA6L7A0A1B0GV03 622 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 F5H5T6 163 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 CAVIN2O95810 425 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 MOCS2O96007 188 aaPredicted RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 ASLP04424 464 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 SOX5P35711 763 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 MATKP42679 507 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 IL12RB1P42701 662 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 SGSHP51688 502 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 JAM2P57087 298 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 POLR2FP61218 127 aaKnown RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 CDR2Q01850 454 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 CREB5Q02930 508 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 CDH18Q13634 790 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 TAF5Q15542 800 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 ZC3H12AQ5D1E8 599 aaKnown RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 RABGAP1LQ5R372 815 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 KIAA1211LQ6NV74 962 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 SERPINA13PQ6UXR4 307 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 TRIM72Q6ZMU5 477 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 CHST9Q7L1S5 443 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 ARCQ7LC44 396 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 CYP2U1Q7Z449 544 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 NOP9Q86U38 636 aaKnown RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 ADIPOR2Q86V24 386 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 ERICH1Q86X53 443 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 KDM1BQ8NB78 822 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 NEK11Q8NG66 645 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 RNF34Q969K3 372 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 MRGPRX1Q96LB2 322 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 ERGIC2Q96RQ1 377 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 NUCKS1Q9H1E3 243 aaKnown RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 FAM207AQ9NSI2 230 aaPredicted RBP13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 SIK3Q9Y2K2 1263 aa13.81□□□□□ -0.2
SIRPB3P-201ENST00000340424 LAMA1P25391 3075 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 SMTNL1A8MU46 457 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 LUC7L3O95232 432 aaKnown RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 MOCS3O95396 460 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 F9P00740 461 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 DLDP09622 509 aaKnown RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 POLR2EP19388 210 aaKnown RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 PTMSP20962 102 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 TACR2P21452 398 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 BCKDHBP21953 392 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 STAT1P42224 750 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 OXCT1P55809 520 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 UBXN1Q04323 297 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 SLC12A1Q13621 1099 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 NCAPHQ15003 741 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 SYCP1Q15431 976 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 FUT11Q495W5 492 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 AASDHQ4L235 1098 aaPredicted RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 TMEM215Q68D42 235 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 MBLAC2Q68D91 279 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 SND1Q7KZF4 910 aaKnown RBP eCLIP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 DGLUCYQ7Z3D6 616 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 RABEPKQ7Z6M1 372 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 CHSY1Q86X52 802 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 RLN3Q8WXF3 142 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 TTC17Q96AE7 1141 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 PGAP3Q96FM1 320 aaPredicted RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 TMEM245Q9H330 911 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 PRDM16Q9HAZ2 1276 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms