RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 ATP11AP98196 1134 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TAF10Q12962 218 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 DUSP4Q13115 394 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 NAB1Q13506 487 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 SEMA5AQ13591 1074 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TUBB8Q3ZCM7 444 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ARHGAP15Q53QZ3 475 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TXNRD3NBQ6F5E7 133 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 SCG3Q8WXD2 468 aaKnown RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 EXOC4Q96A65 974 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ABHD8Q96I13 439 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ZYG11BQ9C0D3 744 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TKTL2Q9H0I9 626 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 MSRAQ9UJ68 235 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ARHGAP26Q9UNA1 814 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ZFP37Q9Y6Q3 630 aaPredicted RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 ZSCAN5CA6NGD5 496 aaPredicted RBP7.4□□□□□ -1.23
NUP43-201ENST00000340413 SUN1O94901 812 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 TCF4P15884 667 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 RGS19P49795 217 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 CDH4P55283 916 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 SARNPP82979 210 aaKnown RBP7.4□□□□□ -1.23
NUP43-201ENST00000340413 ALG1LQ6GMV1 187 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 ZDHHC24Q6UX98 284 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 Q6ZNB5 142 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 HTR3DQ70Z44 454 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 KLHL7Q8IXQ5 586 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 RSAD2Q8WXG1 361 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 CASP10Q92851 521 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 FMO2Q99518 471 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 SEPT5Q99719 369 aaPredicted RBP7.4□□□□□ -1.23
NUP43-201ENST00000340413 NAT9Q9BTE0 207 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 IL21Q9HBE4 155 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 USP29Q9HBJ7 922 aa7.4□□□□□ -1.23
NUP43-201ENST00000340413 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.23
NUP43-201ENST00000340413 A0A0A0MRY4 1105 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ACSL4O60488 711 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 OR4Q2P0C623 313 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 PTPN2P17706 415 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ACTN2P35609 894 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 DUSP6Q16828 381 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 PARP6Q2NL67 630 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 DNAJC21Q5F1R6 531 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 RNASEH2BQ5TBB1 312 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 EMC10Q5UCC4 262 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 SCYL2Q6P3W7 929 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 OTOP2Q7RTS6 562 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CPNE8Q86YQ8 564 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ATAD1Q8NBU5 361 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ZNF512Q96ME7 567 aaPredicted RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 SPATA13Q96N96 652 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CALN1Q9BXU9 219 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ADAM33Q9BZ11 813 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 KLC2Q9H0B6 622 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 MAGEH1Q9H213 219 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 TRPV4Q9HBA0 871 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 XAB2Q9HCS7 855 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 OSER1Q9NX31 292 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 OR12D3Q9UGF7 316 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 PCSK1NQ9UHG2 260 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 E2F8A0AVK6 867 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 PRRG1O14668 218 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 OPA1O60313 960 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CLASP2O75122 1294 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 CLDN11O75508 207 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 RHOXF2BP0C7M4 288 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 RBP3P10745 1247 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 RNASE9P60153 205 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 LAMB3Q13751 1172 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 DDR2Q16832 855 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 TEX26Q8N6G2 289 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 KREMEN2Q8NCW0 462 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 SCAMP5Q8TAC9 235 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 RHOXF2Q9BQY4 288 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 HERPUD2Q9BSE4 406 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CYP4F11Q9HBI6 524 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CALCOCO1Q9P1Z2 691 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CHORDC1Q9UHD1 332 aaPredicted RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 LSM7Q9UK45 103 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 DNPEPQ9ULA0 475 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ARHGAP42A6NI28 874 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 TGM5O43548 720 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 TLR5O60602 858 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 PAGE1O75459 146 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 HARS2P49590 506 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 PLK1P53350 603 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 GEMIN4P57678 1058 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 KCNC3Q14003 757 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 DMC1Q14565 340 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 COL19A1Q14993 1142 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 ANKS1BQ7Z6G8 1248 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 DNAJB7Q7Z6W7 309 aaPredicted RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 PTCD2Q8WV60 388 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 MRPS31Q92665 395 aaKnown RBP7.39□□□□□ -1.23
NUP43-201ENST00000340413 PSMB7Q99436 277 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 SH3GL2Q99962 352 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 CRISPLD1Q9H336 500 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 SFXN1Q9H9B4 322 aa7.39□□□□□ -1.23
NUP43-201ENST00000340413 DTLQ9NZJ0 730 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms