RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ADIPOR2Q86V24 386 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 MFN1Q8IWA4 741 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 LGI2Q8N0V4 545 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.14■□□□□ 0.01
ERCC1-203ENST00000340192 ATP6V0D2Q8N8Y2 350 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 WFIKKN2Q8TEU8 576 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 SPACA7Q96KW9 195 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 CALCOCO1Q9P1Z2 691 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 SLC12A6Q9UHW9 1150 aa15.14■□□□□ 0.01
ERCC1-203ENST00000340192 TNRC6BQ9UPQ9 1833 aaKnown RBP15.13■□□□□ 0.01
ERCC1-203ENST00000340192 M0QYT0 321 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 TEX33O43247 280 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 PABPC1P11940 636 aaKnown RBP15.13■□□□□ 0.01
ERCC1-203ENST00000340192 NDUFV2P19404 249 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 ABCB4P21439 1286 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 TACR2P21452 398 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 CD70P32970 193 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 SCNN1AP37088 669 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 E2F5Q15329 346 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 OTUD1Q5VV17 481 aaPredicted RBP15.13■□□□□ 0.01
ERCC1-203ENST00000340192 C11orf74Q86VG3 221 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 CHSY1Q86X52 802 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 AHI1Q8N157 1196 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 CARNMT1Q8N4J0 409 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 FRMD1Q8N878 549 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 MSANTD4Q8NCY6 345 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 FIBINQ8TAL6 211 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 ADAM33Q9BZ11 813 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 SLC6A17Q9H1V8 727 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
ERCC1-203ENST00000340192 SEMA4GQ9NTN9 838 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 RRN3Q9NYV6 651 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.13■□□□□ 0.01
ERCC1-203ENST00000340192 SDK1Q7Z5N4 2213 aa15.13■□□□□ 0.01
ERCC1-203ENST00000340192 F5H5T6 163 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 GOLGA8SH3BPF8 625 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 ZBTB24O43167 697 aaPredicted RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 CYP1A1P04798 512 aaPredicted RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 TFE3P19532 575 aaPredicted RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 PRKCHP24723 683 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 CDH18Q13634 790 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 BYSLQ13895 437 aaKnown RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 STARD3Q14849 445 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 IQCB1Q15051 598 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 CCDC6Q16204 474 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 CSRP2Q16527 193 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 MAP7D1Q3KQU3 841 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 FUT11Q495W5 492 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 PMS2CLQ68D20 193 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 MBLAC2Q68D91 279 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 SERPINA13PQ6UXR4 307 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 MMS22LQ6ZRQ5 1243 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 ZNF557Q8N988 423 aaPredicted RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 SLC30A5Q8TAD4 765 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 CYB5D2Q8WUJ1 264 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 NT5C3BQ969T7 300 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 LMLNQ96KR4 655 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 MRGPRX1Q96LB2 322 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 NPY6RQ99463 290 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 PRMT1Q99873 361 aaKnown RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 PIGVQ9NUD9 493 aa15.12■□□□□ 0.01
ERCC1-203ENST00000340192 MBD1Q9UIS9 605 aaPredicted RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.12■□□□□ 0.01
ERCC1-203ENST00000340192 MAP3K13O43283 966 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 SYNCRIPO60506 623 aaKnown RBP15.11■□□□□ 0.01
ERCC1-203ENST00000340192 LUC7L3O95232 432 aaKnown RBP15.11■□□□□ 0.01
ERCC1-203ENST00000340192 EPHX1P07099 455 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 PTMSP20962 102 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 MMP8P22894 467 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 MPLP40238 635 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 ID4P47928 161 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 SULT1E1P49888 294 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 LMNB2Q03252 620 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 LMAN2Q12907 356 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 FNDC3BQ53EP0 1204 aaKnown RBP15.11■□□□□ 0.01
ERCC1-203ENST00000340192 FSCBQ5H9T9 825 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 TRIM72Q6ZMU5 477 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 PRR23CQ6ZRP0 262 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 CCDC117Q8IWD4 279 aaPredicted RBP15.11■□□□□ 0.01
ERCC1-203ENST00000340192 RMDN1Q96DB5 314 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 PCDHB18PQ96TA0 734 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 TBCBQ99426 244 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 TMEM59LQ9UK28 342 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 STAP1Q9ULZ2 295 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 PLA2G4CQ9UP65 541 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 PCDHGA5Q9Y5G8 931 aa15.11■□□□□ 0.01
ERCC1-203ENST00000340192 H0Y626 953 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 PAGE1O75459 146 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 ATP5BP06576 529 aaKnown RBP15.1■□□□□ 0.01
ERCC1-203ENST00000340192 DLDP09622 509 aaKnown RBP15.1■□□□□ 0.01
ERCC1-203ENST00000340192 UNGP13051 313 aaPredicted RBP15.1■□□□□ 0.01
ERCC1-203ENST00000340192 HLA-EP13747 358 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 POLR2EP19388 210 aaKnown RBP15.1■□□□□ 0.01
ERCC1-203ENST00000340192 FLT3P36888 993 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 CXCR3P49682 368 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 CREB5Q02930 508 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 DEUP1Q05D60 604 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 MTA1Q13330 715 aa15.1■□□□□ 0.01
ERCC1-203ENST00000340192 PTPRNQ16849 979 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms