RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 EPHB2P29323 1055 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 NR2C2P49116 596 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM72AQ5TYM5 149 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 TTC39BQ5VTQ0 682 aaPredicted RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM72DQ6L9T8 149 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 Q6ZNB5 142 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 HTR3DQ70Z44 454 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 CHSY1Q86X52 802 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM72BQ86X60 149 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 PCDH19Q8TAB3 1148 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 ING5Q8WYH8 240 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 RUNDC3BQ96NL0 473 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 PRMT1Q99873 361 aaKnown RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 SMARCAL1Q9NZC9 954 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 CFAP97Q9P2B7 532 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 XPO7Q9UIA9 1087 aaKnown RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 SH3BP1Q9Y3L3 701 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 NUP205Q92621 2012 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 TCRBV7S2A1N4TA0A589 114 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 NRG2O14511 850 aaPredicted RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 KLKB1P03952 638 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 SERPINB6P35237 376 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 CYP1B1Q16678 543 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 TMCO3Q6UWJ1 677 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 BZW1Q7L1Q6 419 aaKnown RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 NPAS3Q8IXF0 933 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 PQLC3Q8N755 202 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 C12orf50Q8NA57 414 aaPredicted RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 SMRP1Q8NCR6 262 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 ITFG1Q8TB96 612 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 ADAMTS19Q8TE59 1207 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 P3H4Q92791 437 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 USP13Q92995 863 aaPredicted RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 MSLNLQ96KJ4 702 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 NECTIN4Q96NY8 510 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 HERPUD2Q9BSE4 406 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 AP1M1Q9BXS5 423 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 S1PR5Q9H228 398 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 AGO1Q9UL18 857 aaKnown RBP15□□□□□ -0.01
NIPAL3-202ENST00000339255 RAD54BQ9Y620 910 aa15□□□□□ -0.01
NIPAL3-202ENST00000339255 LEFTY2O00292 366 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 RIOK3O14730 519 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 TACR2P21452 398 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 USP4Q13107 963 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 LLGL1Q15334 1064 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 SIX1Q15475 284 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 C5orf22Q49AR2 442 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM133BQ5BKY9 247 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 RABGAP1LQ5R372 815 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 RAP1GAP2Q684P5 730 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 NADSYN1Q6IA69 706 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 RWDD4Q6NW29 188 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 ADAT2Q7Z6V5 191 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 ARID3BQ8IVW6 561 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM217AQ8IXS0 508 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 ZNF683Q8IZ20 524 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 LZTR1Q8N653 840 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 CELF5Q8N6W0 485 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 PLD5Q8N7P1 536 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 ZSCAN18Q8TBC5 510 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 SH3RF2Q8TEC5 729 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 FGF13Q92913 245 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 RPRD1AQ96P16 312 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 MAGEB5Q9BZ81 275 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 ZYG11BQ9C0D3 744 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 RBM12Q9NTZ6 932 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 VANGL2Q9ULK5 521 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 NEU3Q9UQ49 428 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 ZFP37Q9Y6Q3 630 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 CHD5Q8TDI0 1954 aa14.99□□□□□ -0.01
NIPAL3-202ENST00000339255 DCLK1O15075 740 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 GREM1O60565 184 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 PHF2O75151 1096 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 ZNF189O75820 626 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 RHOQP17081 205 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 CHRNA3P32297 505 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 CHKAP35790 457 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 LTBRP36941 435 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 FNTAP49354 379 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 DYNLT1P63172 113 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 ZXDBP98169 803 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 ADCY2Q08462 1091 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 PAFAH1B3Q15102 231 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 CCNG2Q16589 344 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 DRICH1Q6PGQ1 229 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 EP400NLQ6ZTU2 488 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 CPXM2Q8N436 756 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 PRELID2Q8N945 189 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 SMARCD2Q92925 531 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 APOL5Q9BWW9 433 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 LRRC19Q9H756 370 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 TBC1D14Q9P2M4 693 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 CDH7Q9ULB5 785 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 KIF26AQ9ULI4 1882 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 REV3LO60673 3130 aa14.98□□□□□ -0.01
NIPAL3-202ENST00000339255 TYW5A2RUC4 315 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 DRGXA6NNA5 263 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 EFCAB8A8MWE9 144 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms