RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TRMT11Q7Z4G4 463 aaKnown RBP15.82■□□□□ 0.12
PRKN-201ENST00000338468 KBTBD6Q86V97 674 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 CHPFQ8IZ52 775 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 FAM160A2Q8N612 972 aaPredicted RBP15.82■□□□□ 0.12
PRKN-201ENST00000338468 SORCS1Q8WY21 1168 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 BTN2A3PQ96KV6 586 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 TPSD1Q9BZJ3 242 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.82■□□□□ 0.12
PRKN-201ENST00000338468 ELOVL2Q9NXB9 296 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 THAP10Q9P2Z0 257 aaPredicted RBP15.82■□□□□ 0.12
PRKN-201ENST00000338468 TMEM59LQ9UK28 342 aa15.82■□□□□ 0.12
PRKN-201ENST00000338468 SYNJ2BP-COX16A0A087WUM0 186 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 A0A1W2PQC6 194 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 TCRBV21S2A2A0A5A6 115 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 MUC22E2RYF6 1773 aaPredicted RBP15.81■□□□□ 0.12
PRKN-201ENST00000338468 I6L893 689 aaPredicted RBP15.81■□□□□ 0.12
PRKN-201ENST00000338468 CACNA1GO43497 2377 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 APOEP02649 317 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 HOXB2P14652 356 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 TACR2P21452 398 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 CD70P32970 193 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 FLT3P36888 993 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 IL12RB1P42701 662 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 RNASE9P60153 205 aaKnown RBP15.81■□□□□ 0.12
PRKN-201ENST00000338468 ARID5AQ03989 594 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 NR1I3Q14994 352 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 FAM102AQ5T9C2 384 aaPredicted RBP15.81■□□□□ 0.12
PRKN-201ENST00000338468 RAP1GAP2Q684P5 730 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 IL31Q6EBC2 164 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 MMS22LQ6ZRQ5 1243 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 CEP68Q76N32 757 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 BNIPLQ7Z465 357 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 IRF2BP2Q7Z5L9 587 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 ADIPOR2Q86V24 386 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 CFAP52Q8N1V2 620 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 HJURPQ8NCD3 748 aaPredicted RBP15.81■□□□□ 0.12
PRKN-201ENST00000338468 SLC30A5Q8TAD4 765 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 SYT11Q9BT88 431 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 ANLNQ9NQW6 1124 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 PIGVQ9NUD9 493 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 ABCB8Q9NUT2 735 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.81■□□□□ 0.123e-11■■■■■ 81.1
PRKN-201ENST00000338468 COX16Q9P0S2 106 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 STIM2Q9P246 746 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 ANGPTL2Q9UKU9 493 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 INVSQ9Y283 1065 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 RAD54BQ9Y620 910 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 STON1Q9Y6Q2 735 aa15.81■□□□□ 0.12
PRKN-201ENST00000338468 GOLGA8SH3BPF8 625 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 M0QYT0 321 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 GABRG2P18507 467 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 CCR1P32246 355 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 GBP1P32455 592 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 CENPCQ03188 943 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 NME3Q13232 169 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 EIF4HQ15056 248 aaKnown RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 CLEC16AQ2KHT3 1053 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 SKOR2Q2VWA4 1001 aaPredicted RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 FILIP1LQ4L180 1135 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 FSCBQ5H9T9 825 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 E4F1Q66K89 784 aaPredicted RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 TRIM72Q6ZMU5 477 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 CACNA2D4Q7Z3S7 1137 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 CHSY1Q86X52 802 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 LGI2Q8N0V4 545 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 FRMD1Q8N878 549 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 ATP6V0D2Q8N8Y2 350 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 FIBINQ8TAL6 211 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 HMGB4Q8WW32 186 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 ERLEC1Q96DZ1 483 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 PGAP3Q96FM1 320 aaPredicted RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 ZC3H10Q96K80 434 aaKnown RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 TBCBQ99426 244 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 DDX50Q9BQ39 737 aaKnown RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 TTYH3Q9C0H2 523 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 POLMQ9NP87 494 aaPredicted RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 GGA2Q9UJY4 613 aa15.8■□□□□ 0.12
PRKN-201ENST00000338468 INTS6Q9UL03 887 aaKnown RBP15.8■□□□□ 0.12
PRKN-201ENST00000338468 SPAG17Q6Q759 2223 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 GDF9O60383 454 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 ALDH1A2O94788 518 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 ADCY5O95622 1261 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 SLC2A3P11169 496 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 PABPC1P11940 636 aaKnown RBP15.79■□□□□ 0.12
PRKN-201ENST00000338468 BCKDHBP21953 392 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 PRKCHP24723 683 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 PBX1P40424 430 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 CXCR3P49682 368 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 SULT1E1P49888 294 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 FANCCQ00597 558 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 LMAN2Q12907 356 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 ZNF234Q14588 700 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 PTPRNQ16849 979 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 MAP7D1Q3KQU3 841 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 SLC25A52Q3SY17 297 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 FUT11Q495W5 492 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 PLK5Q496M5 336 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 AASDHQ4L235 1098 aaPredicted RBP15.79■□□□□ 0.12
PRKN-201ENST00000338468 ARTNQ5T4W7 220 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 CHST9Q7L1S5 443 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms