RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MYL4P12829 197 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ETS1P14921 441 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RPL21P46778 160 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NR2C2P49116 596 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 VPS41P49754 854 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CYP4F8P98187 520 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MS4A13Q5J8X5 152 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MANEALQ5VSG8 457 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TXNDC8Q6A555 127 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TMCO3Q6UWJ1 677 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 UNC45BQ8IWX7 931 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GLIS1Q8NBF1 620 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RSAD2Q8WXG1 361 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 FAM114A2Q9NRY5 505 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GKN1Q9NS71 199 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HCFC1R1Q9NWW0 138 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ASIC3Q9UHC3 531 aa15.22■□□□□ 0.03
CDK5RAP3-201ENST00000338399 EPOPA6NHQ4 379 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 E9PAM4 449 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 IFNB1P01574 187 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ZSCAN5DPP0CG00 497 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 MBL2P11226 248 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 GDF10P55107 478 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 COG7P83436 770 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 CUL1Q13616 776 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ARTNQ5T4W7 220 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 RTL10Q7L3V2 364 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 TBC1D31Q96DN5 1066 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ATXN3LQ9H3M9 355 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 ASAH2Q9NR71 780 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 VANGL2Q9ULK5 521 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 NEU3Q9UQ49 428 aa15.21■□□□□ 0.03
CDK5RAP3-201ENST00000338399 DOCK4Q8N1I0 1966 aa15.21■□□□□ 0.02
CDK5RAP3-201ENST00000338399 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IRF1P10914 325 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GJA1P17302 382 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DRG2P55039 364 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NRG1Q02297 640 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 AUHQ13825 339 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RAP1GAP2Q684P5 730 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TP53INP2Q8IXH6 220 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FAM71DQ8N9W8 422 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MRPS31Q92665 395 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NEUROG2Q9H2A3 272 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HCFC2Q9Y5Z7 792 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GOLGA6L7A0A1B0GV03 622 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RFXAPO00287 272 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NRG2O14511 850 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 STC2O76061 302 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HDCP19113 662 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RBL1P28749 1068 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ECHS1P30084 290 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CDC25CP30307 473 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HOXC13P31276 330 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 BMP8BP34820 402 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HTR7P34969 479 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ADCY8P40145 1251 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 XRCC4Q13426 336 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FAM182AQ5T1J6 154 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NADSYN1Q6IA69 706 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PDZD4Q76G19 769 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 BZW1Q7L1Q6 419 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NPWQ8N729 165 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MAB21L3Q8N8X9 362 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CCDC89Q8N998 374 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PLD4Q96BZ4 506 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 OLFM3Q96PB7 478 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GCNAQ96QF7 691 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 LMAN2LQ9H0V9 348 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CATSPERBQ9H7T0 1116 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TLE6Q9H808 572 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ARFGAP3Q9NP61 516 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SMPD4Q9NXE4 827 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MPP6Q9NZW5 540 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MYO9BQ13459 2157 aa15.2■□□□□ 0.02
CDK5RAP3-201ENST00000338399 BCLAF3A2AJT9 711 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FGF10O15520 208 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PTPN2P17706 415 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IVDP26440 423 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HOXA9P31269 272 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 STIP1P31948 543 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NRLP54845 237 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RBM10P98175 930 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 BEND6Q5SZJ8 279 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 LRRC31Q6UY01 552 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms