RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CCDC78A2IDD5 438 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 HCRTO43612 131 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 PGM3O95394 542 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 MGAT1P26572 445 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 SERPINB9P50453 376 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 PYROXD2Q8N2H3 581 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 NACA2Q9H009 215 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 ASB7Q9H672 318 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 CNTN3Q9P232 1028 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 MFHAS1Q9Y4C4 1052 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 TPP1O14773 563 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ITM2AO43736 263 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC1A6P48664 564 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 GTF2A2P52657 109 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SNX16P57768 344 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 LIN52Q52LA3 116 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PPM1JQ5JR12 505 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PID1Q7Z2X4 250 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SH3TC2Q8TF17 1288 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 TUT1Q9H6E5 874 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 HSFX1Q9UBD0 423 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC7A8Q9UHI5 535 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZBTB42B2RXF5 422 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PAPSS1O43252 624 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 USP12O75317 370 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZMPSTE24O75844 475 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ANPEPP15144 967 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 GOT1P17174 413 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 NME3Q13232 169 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 TTLL4Q14679 1199 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 VWA5B1Q5TIE3 1220 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 TRIM67Q6ZTA4 783 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SATL1Q86VE3 508 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 TTC30AQ86WT1 665 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PIWIL2Q8TC59 973 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 NDRG1Q92597 394 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC35B4Q969S0 331 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 HSPBAP1Q96EW2 488 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 SIGLEC10Q96LC7 697 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZNF212Q9UDV6 495 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 DOLKQ9UPQ8 538 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PROCP04070 461 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 MCF2P10911 925 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PROZP22891 400 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 GABRB2P47870 512 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 CLCN2P51788 898 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 HDAC4P56524 1084 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 ASPHQ12797 758 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 GRAMD4Q6IC98 578 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PLPPR4Q7Z2D5 763 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 RASSF3Q86WH2 238 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 KBTBD2Q8IY47 623 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 TFB1MQ8WVM0 346 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 CENPKQ9BS16 269 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PNPOQ9NVS9 261 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 PACSIN3Q9UKS6 424 aa16.97■□□□□ 0.31
CDC42EP4-201ENST00000335793 BCLAF3A2AJT9 711 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 ASLP04424 464 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 ERVK-10P10266 1014 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 CCDC130P13994 396 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 NFKBIAP25963 317 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 ADORA2AP29274 412 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 OCRLQ01968 901 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 BTKQ06187 659 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC10A2Q12908 348 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PEX6Q13608 980 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 ITGA9Q13797 1035 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 KIZQ2M2Z5 673 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 SH2D5Q6ZV89 423 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PDZD7Q9H5P4 517 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 SOX13Q9UN79 622 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 SH3GLB1Q9Y371 365 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PPEF2O14830 753 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PRKCHP24723 683 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 CRHR1P34998 444 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 LSAMPQ13449 338 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 TRMT5Q32P41 509 aaKnown RBP16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 HTR3CQ8WXA8 447 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 LRRC39Q96DD0 335 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PANX3Q96QZ0 392 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 MAN1C1Q9NR34 630 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 SNTG2Q9NY99 539 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 PDP2Q9P2J9 529 aa16.96■□□□□ 0.31
CDC42EP4-201ENST00000335793 SDR42E2A6NKP2 422 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 KCNK1O00180 336 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 TM7SF2O76062 418 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 VAV1P15498 845 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 IFRD2Q12894 506 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 DCAF6Q58WW2 860 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 RALGPS1Q5JS13 557 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 SH2D4BQ5SQS7 431 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 APLFQ8IW19 511 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 ADGRF2Q8IZF7 708 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 TNS4Q8IZW8 715 aa16.95■□□□□ 0.3
CDC42EP4-201ENST00000335793 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms