RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 HEMGNQ9BXL5 484 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 GDE1Q9NZC3 331 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 STOML2Q9UJZ1 356 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 CDH7Q9ULB5 785 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 USP15Q9Y4E8 981 aaPredicted RBP22.24■■□□□ 1.15
TPM1-204ENST00000334895 ZNF487B1APH4 448 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 FGGP02679 453 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 USP4Q13107 963 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 AUHQ13825 339 aaKnown RBP22.23■■□□□ 1.15
TPM1-204ENST00000334895 ZNF77Q15935 545 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 ANKRD20A8PQ5CZ79 823 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 HTR3DQ70Z44 454 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 SLC13A5Q86YT5 568 aaPredicted RBP22.23■■□□□ 1.15
TPM1-204ENST00000334895 PQLC3Q8N755 202 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 TTC16Q8NEE8 873 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 ASB16Q96NS5 453 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 LRRC3BQ96PB8 259 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 RCOR3Q9P2K3 495 aaPredicted RBP22.23■■□□□ 1.15
TPM1-204ENST00000334895 THEGQ9P2T0 379 aa22.23■■□□□ 1.15
TPM1-204ENST00000334895 GRXCR2A6NFK2 248 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 EEF2KO00418 725 aaKnown RBP22.22■■□□□ 1.15
TPM1-204ENST00000334895 TCF3P15923 654 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 SLC11A2P49281 568 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 IRAK1P51617 712 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 MTA1Q13330 715 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 KLF1Q13351 362 aaPredicted RBP22.22■■□□□ 1.15
TPM1-204ENST00000334895 DPYSQ14117 519 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 KAZNQ674X7 775 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 RFX8Q6ZV50 586 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 RNF157Q96PX1 679 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 EPAS1Q99814 870 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 DCLK3Q9C098 648 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 L2HGDHQ9H9P8 463 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 VANGL2Q9ULK5 521 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 SH3BP1Q9Y3L3 701 aa22.22■■□□□ 1.15
TPM1-204ENST00000334895 E9PAM4 449 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 H3BRJ5 948 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 LATS1O95835 1130 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 TACR2P21452 398 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 HOXC13P31276 330 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 ARL4AP40617 200 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 HCAR3P49019 387 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 FBXL22Q6P050 247 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 RFWD3Q6PCD5 774 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 CHSY1Q86X52 802 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 DDX42Q86XP3 938 aaKnown RBP eCLIP22.21■■□□□ 1.15
TPM1-204ENST00000334895 BBS7Q8IWZ6 715 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 SMARCD2Q92925 531 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 ARHGEF4Q9NR80 690 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 EFR3BQ9Y2G0 817 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 DOCK4Q8N1I0 1966 aa22.21■■□□□ 1.15
TPM1-204ENST00000334895 PGRMC1O00264 195 aaKnown RBP22.2■■□□□ 1.15
TPM1-204ENST00000334895 AMPD1P23109 780 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 FCARP24071 287 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 VIPR2P41587 438 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 TPI1P60174 286 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 SIX1Q15475 284 aaPredicted RBP22.2■■□□□ 1.15
TPM1-204ENST00000334895 ADGRF1Q5T601 910 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 FAM217AQ8IXS0 508 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 IGSF8Q969P0 613 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 NECTIN4Q96NY8 510 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 ETNK2Q9NVF9 386 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 LSM7Q9UK45 103 aaKnown RBP22.2■■□□□ 1.15
TPM1-204ENST00000334895 NR2E1Q9Y466 385 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 MFHAS1Q9Y4C4 1052 aa22.2■■□□□ 1.15
TPM1-204ENST00000334895 IGLV3-10A0A075B6K4 115 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 E2F8A0AVK6 867 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 GFRA2O00451 464 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 ZNF135P52742 658 aaPredicted RBP22.2■■□□□ 1.14
TPM1-204ENST00000334895 TUBB2AQ13885 445 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 WHAMMP3Q1A5X7 153 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 LONRF2Q1L5Z9 754 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 SLC9A4Q6AI14 798 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 ADAT2Q7Z6V5 191 aaKnown RBP22.2■■□□□ 1.14
TPM1-204ENST00000334895 RFX6Q8HWS3 928 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 CELF5Q8N6W0 485 aaKnown RBP22.2■■□□□ 1.14
TPM1-204ENST00000334895 ST13P5Q8NFI4 369 aaPredicted RBP22.2■■□□□ 1.14
TPM1-204ENST00000334895 PRICKLE1Q96MT3 831 aaPredicted RBP22.2■■□□□ 1.14
TPM1-204ENST00000334895 TUBB2BQ9BVA1 445 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 KIF9Q9HAQ2 790 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 TRPV4Q9HBA0 871 aa22.2■■□□□ 1.14
TPM1-204ENST00000334895 TRDMT1O14717 391 aaKnown RBP22.19■■□□□ 1.14
TPM1-204ENST00000334895 CST8O60676 142 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 EPHB2P29323 1055 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 CETN2P41208 172 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 SGSHP51688 502 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 C5orf22Q49AR2 442 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 ACBD5Q5T8D3 534 aaPredicted RBP22.19■■□□□ 1.14
TPM1-204ENST00000334895 BBS12Q6ZW61 710 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 LGI2Q8N0V4 545 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 PLD5Q8N7P1 536 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 TBC1D31Q96DN5 1066 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 P2RY11Q96G91 374 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 MPP6Q9NZW5 540 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 RNF14Q9UBS8 474 aa22.19■■□□□ 1.14
TPM1-204ENST00000334895 DRGXA6NNA5 263 aa22.18■■□□□ 1.14
TPM1-204ENST00000334895 DCLK1O15075 740 aa22.18■■□□□ 1.14
TPM1-204ENST00000334895 ERCC2P18074 760 aa22.18■■□□□ 1.14
TPM1-204ENST00000334895 VCPP55072 806 aaKnown RBP22.18■■□□□ 1.14
TPM1-204ENST00000334895 DYNLT1P63172 113 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms