RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RAPGEF5Q92565 580 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 HSPH1Q92598 858 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 ALG3Q92685 438 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 IGSF8Q969P0 613 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 TRMT61BQ9BVS5 477 aaKnown RBP18.09■□□□□ 0.49
CHGA-202ENST00000334654 DHX35Q9H5Z1 703 aaKnown RBP18.09■□□□□ 0.49
CHGA-202ENST00000334654 PCDH18Q9HCL0 1135 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 THG1LQ9NWX6 298 aaKnown RBP18.09■□□□□ 0.49
CHGA-202ENST00000334654 COL4A2P08572 1712 aa18.09■□□□□ 0.49
CHGA-202ENST00000334654 C3orf70A6NLC5 250 aaPredicted RBP18.08■□□□□ 0.49
CHGA-202ENST00000334654 DRGXA6NNA5 263 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 TSPAN3O60637 253 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 LRIG2O94898 1065 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 CD48P09326 243 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 TNNT1P13805 278 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 IL4RP24394 825 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 GDI1P31150 447 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 CHKAP35790 457 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 GJC1P36383 396 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 IRAK1P51617 712 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 TNK2Q07912 1038 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 ACBD5Q5T8D3 534 aaPredicted RBP18.08■□□□□ 0.49
CHGA-202ENST00000334654 RNF43Q68DV7 783 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 CHSY1Q86X52 802 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 LGI2Q8N0V4 545 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 TSC1Q92574 1164 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 TLR10Q9BXR5 811 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 EBF3Q9H4W6 596 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 SPHK2Q9NRA0 654 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.08■□□□□ 0.49
CHGA-202ENST00000334654 VANGL2Q9ULK5 521 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 COL4A3Q01955 1670 aa18.08■□□□□ 0.49
CHGA-202ENST00000334654 E9PAM4 449 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 FANCGO15287 622 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 CYP17A1P05093 508 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 KDELR1P24390 212 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 IFNAR2P48551 515 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 PDGFRLQ15198 375 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 DHCR24Q15392 516 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 GAB4Q2WGN9 574 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 LY6G5CQ5SRR4 150 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 TICRRQ7Z2Z1 1910 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 ANKS1BQ7Z6G8 1248 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 KATNAL2Q8IYT4 538 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 IRF7Q92985 503 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 WDR24Q96S15 920 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 KLHL11Q9NVR0 708 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 CWC15Q9P013 229 aaKnown RBP18.07■□□□□ 0.48
CHGA-202ENST00000334654 CCDC66A2RUB6 948 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 MIF4GDA9UHW6 222 aaKnown RBP18.07■□□□□ 0.48
CHGA-202ENST00000334654 KIF5CO60282 957 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 HOXC13P31276 330 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 RPS24P62847 133 aaKnown RBP18.07■□□□□ 0.48
CHGA-202ENST00000334654 FYB2Q5VWT5 728 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 TPGS1Q6ZTW0 290 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 YAF2Q8IY57 180 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 UBE2Q2Q8WVN8 375 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 DDX50Q9BQ39 737 aaKnown RBP18.07■□□□□ 0.48
CHGA-202ENST00000334654 ECT2Q9H8V3 914 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 CD320Q9NPF0 282 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 DDX56Q9NY93 547 aaKnown RBP18.07■□□□□ 0.48
CHGA-202ENST00000334654 MARK1Q9P0L2 795 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 PPARGC1AQ9UBK2 798 aaKnown RBP18.07■□□□□ 0.48
CHGA-202ENST00000334654 ZNF212Q9UDV6 495 aa18.07■□□□□ 0.48
CHGA-202ENST00000334654 NUP205Q92621 2012 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 F5H5T6 163 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 PI4K2BG5E9Z4 385 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 NARSO43776 548 aaKnown RBP18.06■□□□□ 0.48
CHGA-202ENST00000334654 SRGAP2O75044 1071 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 CNTN5O94779 1100 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 PENKP01210 267 aaPredicted RBP18.06■□□□□ 0.48
CHGA-202ENST00000334654 GOT1P17174 413 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 HCAR3P49019 387 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 CDH6P55285 790 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 MMRN1Q13201 1228 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 RUNX3Q13761 415 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 DPYSL3Q14195 570 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 PPP6R3Q5H9R7 873 aaPredicted RBP18.06■□□□□ 0.48
CHGA-202ENST00000334654 DCAF12L1Q5VU92 463 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 NYAP1Q6ZVC0 841 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 CFAP52Q8N1V2 620 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 ATP2A3Q93084 1043 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 CHFRQ96EP1 664 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 TMA16Q96EY4 203 aaKnown RBP18.06■□□□□ 0.48
CHGA-202ENST00000334654 GTSE1Q9NYZ3 720 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 NCOR1O75376 2440 aa18.06■□□□□ 0.48
CHGA-202ENST00000334654 TRIOO75962 3097 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 F5P12259 2224 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 CREB3O43889 395 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 HOXD9P28356 352 aaPredicted RBP18.05■□□□□ 0.48
CHGA-202ENST00000334654 GNG11P61952 73 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 TDGQ13569 410 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 PDK2Q15119 407 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 TAZQ16635 292 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 MPPE1Q53F39 396 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 ALFQ53S48 1182 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 MPP7Q5T2T1 576 aa18.05■□□□□ 0.48
CHGA-202ENST00000334654 MFSD7Q6UXD7 560 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms