RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SLC12A8A0AV02 714 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 CSH1P0DML2 217 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 CSH2P0DML3 217 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SLC2A3P11169 496 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 PROZP22891 400 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SERPINB3P29508 390 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 TPI1P60174 286 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 INTS6LQ5JSJ4 861 aaKnown RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SDHAF4Q5VUM1 108 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 LCA5Q86VQ0 697 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 CHSY1Q86X52 802 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MAGEB18Q96M61 343 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SERPINI1Q99574 410 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MRPL46Q9H2W6 279 aaKnown RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 DNAJB4Q9UDY4 337 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 COL11A1P12107 1806 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MYO7AQ13402 2215 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 PMM2O15305 246 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 PIAS1O75925 651 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MAP3K6O95382 1288 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 GALTP07902 379 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MARCKSL1P49006 195 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 ANKRD20A4Q4UJ75 823 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 PABPC1LQ4VXU2 614 aaKnown RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 UBXN11Q5T124 520 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SYDE1Q6ZW31 735 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SUSD3Q96L08 255 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 B3GALT6Q96L58 329 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MIOSQ9NXC5 875 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MGEA5O60502 916 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 CASP2P42575 452 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 SOWAHAQ2M3V2 549 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 TMCO2Q7Z6W1 182 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 HDAC11Q96DB2 347 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 HIC2Q96JB3 615 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 HAPLN2Q9GZV7 340 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 XAB2Q9HCS7 855 aaKnown RBP12.14□□□□□ -0.47
HDAC6-201ENST00000334136 PCMTD2Q9NV79 361 aa12.14□□□□□ -0.47
HDAC6-201ENST00000334136 MYBPHLA2RUH7 354 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 CST8O60676 142 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 HNRNPH3P31942 346 aaKnown RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 GAS2L1Q99501 681 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 OXCT2Q9BYC2 517 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 O00370 1275 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 NOL4O94818 638 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 CYP2F1P24903 491 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 LMO2P25791 158 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 BOLA3Q53S33 107 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 THEMIS2Q5TEJ8 643 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 MRPL10Q7Z7H8 261 aaKnown RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 ATP6V0D2Q8N8Y2 350 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 PWWP2AQ96N64 755 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 OLFM3Q96PB7 478 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 CORO1BQ9BR76 489 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 NEUROG2Q9H2A3 272 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 ADA2Q9NZK5 511 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 XPO7Q9UIA9 1087 aaKnown RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 A0A0A6YYK5 440 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 LTFP02788 710 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 TYK2P29597 1187 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 SLC11A2P49281 568 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 CNGA3Q16281 694 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 PRPF39Q86UA1 669 aaKnown RBP12.13□□□□□ -0.47
HDAC6-201ENST00000334136 FAM131BQ86XD5 332 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 NUP93Q8N1F7 819 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 FAM172AQ8WUF8 416 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 APOL5Q9BWW9 433 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 UBXN6Q9BZV1 441 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
HDAC6-201ENST00000334136 NEMP1O14524 444 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 EDN1P05305 212 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 RBP3P10745 1247 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 WARSP23381 471 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 TNFRSF8P28908 595 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 LRPAP1P30533 357 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 NDUFV1P49821 464 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 FMO1Q01740 532 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 SLC6A3Q01959 620 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ISLR2Q6UXK2 745 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 DEFB106AQ8N104 65 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 SLC25A41Q8N5S1 370 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 LINC01465Q8N7H1 131 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms