RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ACAP1Q15027 740 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 IFI16Q16666 785 aaKnown RBP17.08■□□□□ 0.32
SHOX-201ENST00000334060 KAZNQ674X7 775 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 NTAN1Q96AB6 310 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 CDK5RAP1Q96SZ6 601 aaKnown RBP17.08■□□□□ 0.32
SHOX-201ENST00000334060 CALN1Q9BXU9 219 aa17.08■□□□□ 0.32
SHOX-201ENST00000334060 F9P00740 461 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 APOEP02649 317 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 TACR2P21452 398 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 AMPD1P23109 780 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 DDX6P26196 483 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHOX-201ENST00000334060 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 SCAPQ12770 1279 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 NNTQ13423 1086 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 RPS6KA1Q15418 735 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 SMAD2Q15796 467 aaKnown RBP17.07■□□□□ 0.32
SHOX-201ENST00000334060 LEXMQ3ZCV2 418 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 MANEALQ5VSG8 457 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 NPNTQ6UXI9 565 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 SND1Q7KZF4 910 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHOX-201ENST00000334060 TFAP2DQ7Z6R9 452 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 TADA2BQ86TJ2 420 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 CHSY1Q86X52 802 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 SYCE1Q8N0S2 351 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 LGI2Q8N0V4 545 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 PLD4Q96BZ4 506 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 HAUS1Q96CS2 278 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 TSPYL1Q9H0U9 437 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 EBF3Q9H4W6 596 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 GDE1Q9NZC3 331 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 LIMD1Q9UGP4 676 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 SH3BP1Q9Y3L3 701 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 JRKLQ9Y4A0 524 aa17.07■□□□□ 0.32
SHOX-201ENST00000334060 E9PAM4 449 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 PSTPIP1O43586 416 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 HARS2P49590 506 aaKnown RBP17.06■□□□□ 0.32
SHOX-201ENST00000334060 MLLT6P55198 1093 aaPredicted RBP17.06■□□□□ 0.32
SHOX-201ENST00000334060 DYNLT1P63172 113 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 DPYSL2Q16555 572 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 BRMS1LQ5PSV4 323 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 POLNQ7Z5Q5 900 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 NPWQ8N729 165 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 PQLC3Q8N755 202 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 KCTD6Q8NC69 237 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 PCDH19Q8TAB3 1148 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 TSC1Q92574 1164 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 CHFRQ96EP1 664 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 BTN2A3PQ96KV6 586 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 CAPZA3Q96KX2 299 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
SHOX-201ENST00000334060 GFRA2O00451 464 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 CDKN2BP42772 138 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 HADHQ16836 314 aaKnown RBP17.06■□□□□ 0.32
SHOX-201ENST00000334060 EFHC2Q5JST6 749 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 NUGGCQ68CJ6 796 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 HTR3DQ70Z44 454 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 CCDC50Q8IVM0 306 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 KATNAL2Q8IYT4 538 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 CSPG4P5Q96PW8 444 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 OSBPL9Q96SU4 736 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
SHOX-201ENST00000334060 C10orf88Q9H8K7 445 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 GTSE1Q9NYZ3 720 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 STIM2Q9P246 746 aa17.06■□□□□ 0.32
SHOX-201ENST00000334060 ZFP37Q9Y6Q3 630 aaPredicted RBP17.06■□□□□ 0.32
SHOX-201ENST00000334060 HTR4Q13639 388 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 AAK1Q2M2I8 961 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 RWDD4Q6NW29 188 aaKnown RBP17.05■□□□□ 0.32
SHOX-201ENST00000334060 SPOCD1Q6ZMY3 1216 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 C12orf40Q86WS4 652 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 SFTPA1Q8IWL2 248 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 CELF5Q8N6W0 485 aaKnown RBP17.05■□□□□ 0.32
SHOX-201ENST00000334060 HPS4Q9NQG7 708 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 SNX12Q9UMY4 172 aa17.05■□□□□ 0.32
SHOX-201ENST00000334060 R3HDM2Q9Y2K5 976 aaKnown RBP17.05■□□□□ 0.32
SHOX-201ENST00000334060 TCF20Q9UGU0 1960 aaKnown RBP17.05■□□□□ 0.32
SHOX-201ENST00000334060 NARSO43776 548 aaKnown RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 RWDD2BP57060 319 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 KRT81Q14533 505 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 BOLA3Q53S33 107 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 FSCBQ5H9T9 825 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 LRRC38Q5VT99 294 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 ATP6V0D2Q8N8Y2 350 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 BPIFB1Q8TDL5 484 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 TEKT4Q8WW24 435 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 ZFP14Q9HCL3 533 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 ARHGEF4Q9NR80 690 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 ZNF212Q9UDV6 495 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 MYO10Q9HD67 2058 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 KIF26AQ9ULI4 1882 aaPredicted RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 hCG_1818297A0A087WSY0 165 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 KRT7P08729 469 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 PECAM1P16284 738 aaPredicted RBP17.04■□□□□ 0.32
SHOX-201ENST00000334060 CASQ1P31415 396 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 SOX9P48436 509 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 DPYSQ14117 519 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 LY6G5CQ5SRR4 150 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 ADGRF1Q5T601 910 aa17.04■□□□□ 0.32
SHOX-201ENST00000334060 PAPD7Q5XG87 772 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms