RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 OGDHQ02218 1023 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 PDE1CQ14123 709 aaPredicted RBP18.63■□□□□ 0.57
PKP3-201ENST00000331563 SUPT20HL1Q3ZLR7 823 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 XKR9Q5GH70 373 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 GADL1Q6ZQY3 521 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 ARCQ7LC44 396 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 RNF148Q8N7C7 305 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 ZNF778Q96MU6 729 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 TBC1D23Q9NUY8 699 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 SLC9A2Q9UBY0 812 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 SBF1O95248 1867 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 XPOTO43592 962 aaKnown RBP18.63■□□□□ 0.57
PKP3-201ENST00000331563 OCM2P0CE71 109 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 OCMP0CE72 109 aaPredicted RBP18.63■□□□□ 0.57
PKP3-201ENST00000331563 CYP2C9P11712 490 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 NUP107P57740 925 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 NRF1Q16656 503 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 ANKDD1AQ495B1 522 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 DARS2Q6PI48 645 aaKnown RBP18.63■□□□□ 0.57
PKP3-201ENST00000331563 STARD8Q92502 1023 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 OSBPL10Q9BXB5 764 aa18.63■□□□□ 0.57
PKP3-201ENST00000331563 PAIP1Q9H074 479 aaKnown RBP18.63■□□□□ 0.57
PKP3-201ENST00000331563 RLFQ13129 1914 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 FOXD2O60548 495 aaPredicted RBP18.62■□□□□ 0.57
PKP3-201ENST00000331563 KLHL41O60662 606 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 FBXO21O94952 628 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 HSPA13P48723 471 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 PPP6R3Q5H9R7 873 aaPredicted RBP18.62■□□□□ 0.57
PKP3-201ENST00000331563 ELMSAN1Q6PJG2 1045 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 SULF1Q8IWU6 871 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 SERPINI1Q99574 410 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 TEX13BQ9BXU2 312 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 MAN1C1Q9NR34 630 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 RAB6BQ9NRW1 208 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 TTLL3Q9Y4R7 772 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 MYH9P35579 1960 aaKnown RBP18.62■□□□□ 0.57
PKP3-201ENST00000331563 KIAA1217Q5T5P2 1943 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 EIF2B2P49770 351 aaKnown RBP18.62■□□□□ 0.57
PKP3-201ENST00000331563 SNRPFP62306 86 aaKnown RBP18.62■□□□□ 0.57
PKP3-201ENST00000331563 SP2Q02086 613 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 PSMD6Q15008 389 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 KRT80Q6KB66 452 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 SWSAP1Q6NVH7 229 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 SLC7A5P1Q8MH63 180 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 ADCY4Q8NFM4 1077 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 NDEL1Q9GZM8 345 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 ATAD3AQ9NVI7 634 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 GABBR1Q9UBS5 961 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 TIMM22Q9Y584 194 aa18.62■□□□□ 0.57
PKP3-201ENST00000331563 HNRNPDLO14979 420 aaKnown RBP18.61■□□□□ 0.57
PKP3-201ENST00000331563 HLA-DRAP01903 254 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 METTL21CQ5VZV1 264 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 SPATA18Q8TC71 538 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 DCPSQ96C86 337 aaKnown RBP18.61■□□□□ 0.57
PKP3-201ENST00000331563 ZNF512Q96ME7 567 aaPredicted RBP18.61■□□□□ 0.57
PKP3-201ENST00000331563 CALN1Q9BXU9 219 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 C19orf81C9J6K1 198 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 ZC3H11AO75152 810 aaKnown RBP eCLIP18.61■□□□□ 0.573e-13■■■■□ 20.8
PKP3-201ENST00000331563 ZNF23P17027 643 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 ACAT1P24752 427 aaKnown RBP18.61■□□□□ 0.57
PKP3-201ENST00000331563 CRHR1P34998 444 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 PPARGP37231 505 aaPredicted RBP18.61■□□□□ 0.57
PKP3-201ENST00000331563 PIGHQ14442 188 aaPredicted RBP18.61■□□□□ 0.57
PKP3-201ENST00000331563 TEDDM1Q5T9Z0 273 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 FAXCQ5TGI0 409 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 C9orf131Q5VYM1 1079 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 EME1Q96AY2 570 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 TBC1D22BQ9NU19 505 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 STK39Q9UEW8 545 aa18.61■□□□□ 0.57
PKP3-201ENST00000331563 PSMA2P25787 234 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 SERPINB5P36952 375 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 SLC5A3P53794 718 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 FSCBQ5H9T9 825 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 CYP4A22Q5TCH4 519 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 DCDC5Q6ZRR9 648 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.6■□□□□ 0.572e-6■■■■■ 45.7
PKP3-201ENST00000331563 TMEM174Q8WUU8 243 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 MFSD14AQ96MC6 490 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 CDRT15Q96T59 188 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 PKP2Q99959 881 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 STN1Q9H668 368 aaKnown RBP18.6■□□□□ 0.57
PKP3-201ENST00000331563 CSH1P0DML2 217 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 CSH2P0DML3 217 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 ZNF12P17014 697 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 MMP8P22894 467 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 CCND2P30279 289 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 L1CAMP32004 1257 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 PTPN7P35236 360 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 PKNOX1P55347 436 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 CLVS1Q8IUQ0 354 aaPredicted RBP18.6■□□□□ 0.57
PKP3-201ENST00000331563 KCTD6Q8NC69 237 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 BHLHE22Q8NFJ8 381 aaPredicted RBP18.6■□□□□ 0.57
PKP3-201ENST00000331563 NSUN6Q8TEA1 469 aaKnown RBP18.6■□□□□ 0.57
PKP3-201ENST00000331563 SCHIP1Q9P0W5 487 aaPredicted RBP18.6■□□□□ 0.57
PKP3-201ENST00000331563 PCSK1NQ9UHG2 260 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 ADAMTS5Q9UNA0 930 aa18.6■□□□□ 0.57
PKP3-201ENST00000331563 ARHGEF37A1IGU5 675 aa18.59■□□□□ 0.57
PKP3-201ENST00000331563 GHRHRQ02643 423 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms