RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 COLGALT1Q8NBJ5 622 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 HAPLN3Q96S86 360 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 PPANQ9NQ55 473 aaKnown RBP17.47■□□□□ 0.39
DDX41-201ENST00000330503 TBX21Q9UL17 535 aa17.47■□□□□ 0.39
DDX41-201ENST00000330503 MTMR11A4FU01 709 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 KCNU1A8MYU2 1149 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 PAGE1O75459 146 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 EPHB2P29323 1055 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 PHBP35232 272 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 GRIA1P42261 906 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 MAGEA3P43357 314 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.39
DDX41-201ENST00000330503 MPP2Q14168 576 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 EFTUD2Q15029 972 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■■■ 32.7
DDX41-201ENST00000330503 TMED2Q15363 201 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 C1orf53Q5VUE5 145 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 ZNF567Q8N184 647 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 ATXN2LQ8WWM7 1075 aaKnown RBP17.46■□□□□ 0.39
DDX41-201ENST00000330503 XPO6Q96QU8 1125 aaKnown RBP17.46■□□□□ 0.39
DDX41-201ENST00000330503 TTPALQ9BTX7 342 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 CEP41Q9BYV8 373 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 SIK2Q9H0K1 926 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 FBXO44Q9H4M3 255 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 ACSS3Q9H6R3 686 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 PLAC1Q9HBJ0 212 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 GMIPQ9P107 970 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 SLC24A2Q9UI40 661 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 PLXNA3P51805 1871 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 MYO16Q9Y6X6 1858 aa17.46■□□□□ 0.39
DDX41-201ENST00000330503 FAM92AA1XBS5 289 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 PIAS1O75925 651 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 FDFT1P37268 417 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 PPP2R5DQ14738 602 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 RASA2Q15283 850 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 PRSS55Q6UWB4 352 aaPredicted RBP17.45■□□□□ 0.38
DDX41-201ENST00000330503 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 MRRFQ96E11 262 aaKnown RBP17.45■□□□□ 0.38
DDX41-201ENST00000330503 DHRS4Q9BTZ2 278 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 CWH43Q9H720 699 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 WBP1LQ9NX94 342 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 SEPT10Q9P0V9 454 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 FETUBQ9UGM5 382 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 MICAL3Q7RTP6 2002 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 F5H423 210 aaPredicted RBP17.45■□□□□ 0.38
DDX41-201ENST00000330503 H7C4K7 107 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 OPHN1O60890 802 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 SRGAP2BP0DMP2 458 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 CPB1P15086 417 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 CCR1P32246 355 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 GEMIN4P57678 1058 aaKnown RBP17.45■□□□□ 0.38
DDX41-201ENST00000330503 PPIDQ08752 370 aaKnown RBP17.45■□□□□ 0.38
DDX41-201ENST00000330503 GALNT2Q10471 571 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 MSANTD2Q6P1R3 559 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 NLRP14Q86W24 1093 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 SIGLEC10Q96LC7 697 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 VN1R3Q9BXE9 311 aa17.45■□□□□ 0.38
DDX41-201ENST00000330503 GMNCA6NCL1 334 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 NCAM2O15394 837 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 ADAM12O43184 909 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 HAPLN1P10915 354 aaPredicted RBP17.44■□□□□ 0.38
DDX41-201ENST00000330503 YWHAQP27348 245 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 PKN2Q16513 984 aaKnown RBP17.44■□□□□ 0.38
DDX41-201ENST00000330503 MANEALQ5VSG8 457 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 ANKS3Q6ZW76 656 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 TRABD2AQ86V40 505 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 SPPL2BQ8TCT7 592 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 CCT8L2Q96SF2 557 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 PPCSQ9HAB8 311 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 ATP11BQ9Y2G3 1177 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 ACTL7BQ9Y614 415 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 NUP205Q92621 2012 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 TMEM120BA0PK00 339 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 KCNK1O00180 336 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 STK10O94804 968 aaKnown RBP17.44■□□□□ 0.38
DDX41-201ENST00000330503 C1QAP02745 245 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 BRAFP15056 766 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 PTPN3P26045 913 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 DUSP4Q13115 394 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 IKBKEQ14164 716 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 PARP6Q2NL67 630 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 CNKSR3Q6P9H4 555 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 SRRM1Q8IYB3 904 aaKnown RBP17.44■□□□□ 0.38
DDX41-201ENST00000330503 DEPDC1BQ8WUY9 529 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 SLC39A13Q96H72 371 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 SPATA17Q96L03 361 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 FCRL2Q96LA5 508 aaPredicted RBP17.44■□□□□ 0.38
DDX41-201ENST00000330503 BRD8Q9H0E9 1235 aa17.44■□□□□ 0.38
DDX41-201ENST00000330503 INTS9Q9NV88 658 aaKnown RBP17.44■□□□□ 0.38
DDX41-201ENST00000330503 TCRBV9S1A1TA0A576 114 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 PSMB4P28070 264 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 HOXC13P31276 330 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 RASIP1Q5U651 963 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 RWDD4Q6NW29 188 aaKnown RBP17.43■□□□□ 0.38
DDX41-201ENST00000330503 ADGRD1Q6QNK2 874 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 C14orf80Q86SX3 495 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 ARHGAP18Q8N392 663 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 MPP5Q8N3R9 675 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 DPF3Q92784 378 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 HDAC11Q96DB2 347 aa17.43■□□□□ 0.38
DDX41-201ENST00000330503 CFAP36Q96G28 342 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms