RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 COG4Q9H9E3 785 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 C17orf75Q9HAS0 396 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 XPNPEP3Q9NQH7 507 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ZNF70Q9UC06 446 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 EMCNQ9ULC0 261 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 SSX2IPQ9Y2D8 614 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 FIS1Q9Y3D6 152 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ALDOAP04075 364 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 MMP10P09238 476 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 MLH1P40692 756 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 HDAC4P56524 1084 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 CLDN10P78369 228 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 GBE1Q04446 702 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 SH2D4BQ5SQS7 431 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 NIPA1Q7RTP0 329 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 TRIML2Q8N7C3 387 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 NIPA2Q8N8Q9 360 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 TMIGD2Q96BF3 282 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ATG4CQ96DT6 458 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ASNSD1Q9NWL6 643 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 AFG3L2Q9Y4W6 797 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 APOL1O14791 398 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 SUPT3HO75486 399 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 LDHAP00338 332 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 EPHA3P29320 983 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 TCF7P36402 384 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 MNX1P50219 401 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 THOP1P52888 689 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 MYBPC1Q00872 1141 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 TFDP2Q14188 446 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 PCLAFQ15004 111 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 RARS2Q5T160 578 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 EEPD1Q7L9B9 569 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 LRRC71Q8N4P6 559 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 BHLHE22Q8NFJ8 381 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 CMASQ8NFW8 434 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 GRIN3AQ8TCU5 1115 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 MAPK15Q8TD08 544 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 Q9H521 79 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 CAAP1Q9H8G2 361 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ZDHHC7Q9NXF8 308 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 PTTG2Q9NZH5 202 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 FAF1Q9UNN5 650 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 SYNJ2BP-COX16A0A087WUM0 186 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PLIN3O60664 434 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 STBD1O95210 358 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 SERPINE1P05121 402 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 GJB1P08034 283 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 CDK4P11802 303 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 RPL10P27635 214 aaKnown RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 CCND2P30279 289 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 ATXN1P54253 815 aaKnown RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 CDKL1Q00532 357 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 KLF10Q13118 480 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 SNAPC2Q13487 334 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 C21orf62-AS1Q17RA5 79 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 Q3C1V9 767 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 TMEM198Q66K66 360 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PPP1R2P3Q6NXS1 205 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 JADE3Q92613 823 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 RNF157Q96PX1 679 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 EBNA1BP2Q99848 306 aaKnown RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 SDCBP2Q9H190 292 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 NRDE2Q9H7Z3 1164 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 CAB39LQ9H9S4 337 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 FAM49BQ9NUQ9 324 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 COX16Q9P0S2 106 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 ITGA11Q9UKX5 1188 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 MFHAS1Q9Y4C4 1052 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 BTAF1O14981 1849 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 GOLGA8CPA6NN73 597 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PRKCHP24723 683 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 MGAT1P26572 445 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 GABRB2P47870 512 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PPIDQ08752 370 aaKnown RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 CYLC2Q14093 348 aaPredicted RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 GRM2Q14416 872 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 DLG2Q15700 870 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 LRRC8BQ6P9F7 803 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PQLC3Q8N755 202 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 KCNK16Q96T55 309 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 SORT1Q99523 831 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 CCDC28BQ9BUN5 200 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 ARHGEF38Q9NXL2 777 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 CNTN6Q9UQ52 1028 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 RPS6KL1Q9Y6S9 549 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 CROCCQ5TZA2 2017 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 MICAL2O94851 1124 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 IL1BP01584 269 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 ABCE1P61221 599 aaKnown RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 TRNP1Q6NT89 227 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PGM2L1Q6PCE3 622 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 ADGRG6Q86SQ4 1221 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PCDH19Q8TAB3 1148 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 RCN3Q96D15 328 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 SIGLEC10Q96LC7 697 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 ZNF512Q96ME7 567 aaPredicted RBP8.09□□□□□ -1.11
VMA21-201ENST00000330374 CATSPER2Q96P56 530 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 DCUN1D5Q9BTE7 237 aa8.09□□□□□ -1.11
VMA21-201ENST00000330374 PRDM16Q9HAZ2 1276 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms