RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TTPALQ9BTX7 342 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 ACSS3Q9H6R3 686 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 OSER1Q9NX31 292 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 IL37Q9NZH6 218 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 SLC24A2Q9UI40 661 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TBX21Q9UL17 535 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 MYO18AQ92614 2054 aaKnown RBP15.38■□□□□ 0.05
TPM3-205ENST00000328159 PAGE1O75459 146 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 UPP2O95045 317 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 CCR1P32246 355 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 SERPINB6P35237 376 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 WASHC5Q12768 1159 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 SMARCB1Q12824 385 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 IKBKEQ14164 716 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 RASA2Q15283 850 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 MSANTD2Q6P1R3 559 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 CNKSR3Q6P9H4 555 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 RNF19BQ6ZMZ0 732 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 TAS1R1Q7RTX1 841 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 COLGALT1Q8NBJ5 622 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 BCAS4Q8TDM0 211 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 DIS3LQ8TF46 1054 aaKnown RBP15.38■□□□□ 0.05
TPM3-205ENST00000328159 SERPINB11Q96P15 392 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 OXCT2Q9BYC2 517 aaPredicted RBP15.38■□□□□ 0.05
TPM3-205ENST00000328159 BRD8Q9H0E9 1235 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 RABEP2Q9H5N1 569 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 SEPT10Q9P0V9 454 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 GMIPQ9P107 970 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 FETUBQ9UGM5 382 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 NUDT5Q9UKK9 219 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 ATP11BQ9Y2G3 1177 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 GREB1Q4ZG55 1949 aa15.38■□□□□ 0.05
TPM3-205ENST00000328159 NUP205Q92621 2012 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 FOXO6A8MYZ6 492 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 SOAT2O75908 522 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 VNN2O95498 520 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 HAPLN1P10915 354 aaPredicted RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 YWHAQP27348 245 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 GEMIN4P57678 1058 aaKnown RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 PPIDQ08752 370 aaKnown RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 NR1H3Q13133 447 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 KLHL38Q2WGJ6 581 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 PRSS55Q6UWB4 352 aaPredicted RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 ZNF534Q76KX8 674 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 AGGF1Q8N302 714 aaeCLIP15.37■□□□□ 0.051e-7■□□□□ 11.2
TPM3-205ENST00000328159 GPR152Q8TDT2 470 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 XPO6Q96QU8 1125 aaKnown RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 SIK2Q9H0K1 926 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 PPANQ9NQ55 473 aaKnown RBP15.37■□□□□ 0.05
TPM3-205ENST00000328159 TMEM51Q9NW97 253 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 SLC27A5Q9Y2P5 690 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 ACTL7BQ9Y614 415 aa15.37■□□□□ 0.05
TPM3-205ENST00000328159 FAM92AA1XBS5 289 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SPAG6O75602 509 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SRGAP2BP0DMP2 458 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 CREB1P16220 341 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 MX2P20592 715 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 HTR7P34969 479 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 MAGEA3P43357 314 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SEC24CP53992 1094 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 GALNT2Q10471 571 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 PARP6Q2NL67 630 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 RWDD4Q6NW29 188 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 NLRP14Q86W24 1093 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 ZNF567Q8N184 647 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 C2orf15Q8WU43 125 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 LRRC39Q96DD0 335 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SPATA17Q96L03 361 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 CEP41Q9BYV8 373 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 XAB2Q9HCS7 855 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 EIF2B3Q9NR50 452 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 TMEM39AQ9NV64 488 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 INTS9Q9NV88 658 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 WBP1LQ9NX94 342 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 PSMC3IPQ9P2W1 217 aaPredicted RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 NEU3Q9UQ49 428 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SHROOM3Q8TF72 1996 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 TMEM120BA0PK00 339 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 KCNU1A8MYU2 1149 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 ALDH7A1P49419 539 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 SARNPP82979 210 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 CDK16Q00536 496 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 EFTUD2Q15029 972 aaKnown RBP eCLIP15.36■□□□□ 0.052e-18■■■■□ 20.8
TPM3-205ENST00000328159 MGAT5BQ3V5L5 792 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 MANEALQ5VSG8 457 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 TRABD2AQ86V40 505 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 SRRM1Q8IYB3 904 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 ATXN2LQ8WWM7 1075 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 FBXO32Q969P5 355 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 HDAC11Q96DB2 347 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 MRRFQ96E11 262 aaKnown RBP15.36■□□□□ 0.05
TPM3-205ENST00000328159 CFAP36Q96G28 342 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 ZNF333Q96JL9 665 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 CWH43Q9H720 699 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 COMMD8Q9NX08 183 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 IGSF9Q9P2J2 1179 aa15.36■□□□□ 0.05
TPM3-205ENST00000328159 TLR6Q9Y2C9 796 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms