RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 WDR64B1ANS9 1081 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 H0YIN7 160 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 FOXD2O60548 495 aaPredicted RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 ENTPD3O75355 529 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 SLC5A3P53794 718 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 CDH15P55291 814 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 CCDC92Q53HC0 331 aaPredicted RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 DENND1BQ6P3S1 775 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 DCDC5Q6ZRR9 648 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 CPNE9Q8IYJ1 553 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
CCDC60-201ENST00000327554 WRNIP1Q96S55 665 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 IMPG2Q9BZV3 1241 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 COQ10BQ9H8M1 238 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 VPS45Q9NRW7 570 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 TBC1D23Q9NUY8 699 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 TMEM216Q9P0N5 145 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 HEY1Q9Y5J3 304 aa13.12□□□□□ -0.31
CCDC60-201ENST00000327554 SIP14410 1827 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 RGSL1A5PLK6 1076 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 NOP56O00567 594 aaKnown RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 ATG7O95352 703 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 FUCA1P04066 466 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 C8BP07358 591 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 CCDC130P13994 396 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 ME2P23368 584 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 RBL1P28749 1068 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 GMPRP36959 345 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 MTMR1Q13613 665 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 IKBKEQ14164 716 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 KCTD21Q4G0X4 260 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 RWDD4Q6NW29 188 aaKnown RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 TMEM53Q6P2H8 277 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 CLVS1Q8IUQ0 354 aaPredicted RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 EME1Q96AY2 570 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 C12orf43Q96C57 262 aaKnown RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 RCN3Q96D15 328 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 CNDP1Q96KN2 507 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 NEURL2Q9BR09 285 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 OSBPL11Q9BXB4 747 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF341Q9BYN7 854 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 MAF1Q9H063 256 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 PNPLA3Q9NST1 481 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 STYXL1Q9Y6J8 313 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 STX16-NPEPL1H3BU86 382 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 PLOD2O00469 737 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 P4HA1P13674 534 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 GABRB3P28472 473 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 PPARGP37231 505 aaPredicted RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 RXRGP48443 463 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 BCAP31P51572 246 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 DPYSQ14117 519 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 PGAM4Q8N0Y7 254 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 HM13Q8TCT9 377 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 BORCS5Q969J3 196 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 ACO2Q99798 780 aaKnown RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 DCUN1D5Q9BTE7 237 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 TCF7L2Q9NQB0 619 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 KIAA1522Q9P206 1035 aaPredicted RBP13.11□□□□□ -0.31
CCDC60-201ENST00000327554 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 CDY2AQ9Y6F7 541 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
CCDC60-201ENST00000327554 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 CFLARO15519 480 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 ASS1P00966 412 aaKnown RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 CST3P01034 146 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 EIF2AK2P19525 551 aaKnown RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 HMOX2P30519 316 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 GJA8P48165 433 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 NIPAL4Q0D2K0 466 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 NAPRTQ6XQN6 538 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 CYP4V2Q6ZWL3 525 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 TMEM79Q9BSE2 394 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PAIP1Q9H074 479 aaKnown RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
CCDC60-201ENST00000327554 PSMD12O00232 456 aaPredicted RBP13.1□□□□□ -0.31
CCDC60-201ENST00000327554 DGKIO75912 1065 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms