RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PPP2R2DQ66LE6 453 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 KAZNQ674X7 775 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 C8orf74Q6P047 294 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 CYB5D1Q6P9G0 228 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 TDHQ8IZJ6 230 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 PYROXD2Q8N2H3 581 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 PQLC3Q8N755 202 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 MAGOHBQ96A72 148 aaKnown RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 FCRL2Q96LA5 508 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 CCDC114Q96M63 670 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 CSPG4P5Q96PW8 444 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 FRMD8P1Q9BZ68 369 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 MAGEB5Q9BZ81 275 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 CCSER2Q9H7U1 834 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 ZNF334Q9HCZ1 680 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 TMPRSS4Q9NRS4 437 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 SPATS2LQ9NUQ6 558 aaKnown RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 TRPM5Q9NZQ8 1165 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 MARCH2Q9P0N8 246 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 STIM2Q9P246 746 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 ANAPC1Q9H1A4 1944 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 BHMG1C9JSJ3 638 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 APOC4-APOC2K7ER74 178 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 ZMYND10O75800 440 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 PAPLNO95428 1278 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 TBX18O95935 607 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 APOC2P02655 101 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 POU2F2P09086 479 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 NEFHP12036 1026 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 NR1D1P20393 614 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 ATP5C1P36542 298 aaKnown RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 COILP38432 576 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 ARL4AP40617 200 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 KPNA1P52294 538 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 TBX4P57082 545 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 NRG1Q02297 640 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 EFEMP1Q12805 493 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 MTA1Q13330 715 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 DHX34Q14147 1143 aaKnown RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 PPP6R3Q5H9R7 873 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 PPM1LQ5SGD2 360 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 C10orf120Q5SQS8 335 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 TTC27Q6P3X3 843 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 TMC8Q8IU68 726 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 PLD5Q8N7P1 536 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 CCDC26Q8TAB7 109 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 FAM210AQ96ND0 272 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 MAK16Q9BXY0 300 aaKnown RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 SLC28A3Q9HAS3 691 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 CD248Q9HCU0 757 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
DDX39A-202ENST00000324340 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
DDX39A-202ENST00000324340 DENND4CQ5VZ89 1909 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 H3BRJ5 948 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 COCHO43405 550 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 RAD51CO43502 376 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 LIASO43766 372 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 NEBLO76041 1014 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 OLFM2O95897 454 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 MYBL2P10244 700 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 ZFXP17010 805 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 GOT1P17174 413 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 TGM2P21980 687 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 HTR7P34969 479 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 PTGIRP43119 386 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 EPHA5P54756 1037 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 DPYSQ14117 519 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 ARTNQ5T4W7 220 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 CCDC137Q6PK04 289 aaKnown RBP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 RFX8Q6ZV50 586 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 MAATS1Q7Z4T9 603 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 ELMOD1Q8N336 334 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 SLC35B2Q8TB61 432 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 C1orf54Q8WWF1 131 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 NKD2Q969F2 451 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 RNF34Q969K3 372 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 ATP6V1G3Q96LB4 118 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 C1orf74Q96LT6 269 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 OR12D3Q9UGF7 316 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 RASAL2Q9UJF2 1139 aa13.16□□□□□ -0.3
DDX39A-202ENST00000324340 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
DDX39A-202ENST00000324340 CFAP73A6NFT4 308 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms