RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 A0A0G2JK05 382 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 LRRC10BA6NIK2 292 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 STMND1H3BQB6 276 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 KLRC4O43908 158 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 CACNG3O60359 315 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 CCNT1O60563 726 aaKnown RBP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 GAS7O60861 476 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 ACSL1P33121 698 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 YARSP54577 528 aaKnown RBP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 TPM4P67936 248 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 CAPSQ13938 189 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 OVOS1Q6IE37 1185 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 ALKAL1Q6UXT8 129 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 C11orf57Q6ZUT1 292 aaPredicted RBP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 EFL1Q7Z2Z2 1120 aaKnown RBP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 SLC25A45Q8N413 288 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 NOC3LQ8WTT2 800 aaKnown RBP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 NAT6Q93015 286 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 ARRDC3Q96B67 414 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 FUBP3Q96I24 572 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 CEP295NLQ96MC4 621 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 MARK1Q9P0L2 795 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 COPG2Q9UBF2 871 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 SEL1LQ9UBV2 794 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 DDX25Q9UHL0 483 aaKnown RBP6.99□□□□□ -1.29
CSTF3-201ENST00000323959 BOD1L1Q8NFC6 3051 aa6.99□□□□□ -1.29
CSTF3-201ENST00000323959 PRAMEF33A0A0G2JMD5 474 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 VWA3AA6NCI4 1184 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 RNF212BA8MTL3 300 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 PRAMEF10O60809 474 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 LYPLA2O95372 231 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 LIFP15018 202 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 PPP3CCP48454 512 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 PDX1P52945 283 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 MYL5Q02045 173 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 DMP1Q13316 513 aaPredicted RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 CAMK4Q16566 473 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 TTC31Q49AM3 519 aaPredicted RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 ZC2HC1CQ53FD0 456 aaPredicted RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 GLRA4Q5JXX5 417 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 USP30Q70CQ3 517 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 SPATS2Q86XZ4 545 aaKnown RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 ZC3H3Q8IXZ2 948 aaKnown RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 NDRG1Q92597 394 aaKnown RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 IFT43Q96FT9 208 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 EPSTI1Q96J88 318 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 CEP170P1Q96L14 293 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 PANK2Q9BZ23 570 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 C2orf40Q9H1Z8 148 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 CYP4F12Q9HCS2 524 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 TUFT1Q9NNX1 390 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 WDR35Q9P2L0 1181 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 RWDD2AQ9UIY3 292 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 VAV3Q9UKW4 847 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 SCML1Q9UN30 329 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 ARID1BQ8NFD5 2236 aaPredicted RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 TMEM150BA6NC51 233 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 NEMP2A6NFY4 417 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 SLC37A4O43826 429 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 ZNF500O60304 480 aaPredicted RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 RFPL1O75677 317 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 OLFM2O95897 454 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 HEXAP06865 529 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 BMP6P22004 513 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 DGKAP23743 735 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 NMT1P30419 496 aaKnown RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 ZNF75DP51815 510 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 SPIDRQ14159 915 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 NFIL3Q16649 462 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 CDKAL1Q5VV42 579 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 ZCCHC8Q6NZY4 707 aaKnown RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 FAM124AQ86V42 546 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 GOLGA1Q92805 767 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 HVCN1Q96D96 273 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 DHTKD1Q96HY7 919 aaPredicted RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 OSBPL2Q9H1P3 480 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 MCCC2Q9HCC0 563 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 DNAJC17Q9NVM6 304 aaKnown RBP6.98□□□□□ -1.29
CSTF3-201ENST00000323959 KLHL11Q9NVR0 708 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 CCDC168Q8NDH2 2452 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 RTTNQ86VV8 2226 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 CSPG4Q6UVK1 2322 aa6.98□□□□□ -1.29
CSTF3-201ENST00000323959 TTLL13PA6NNM8 815 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PPP1R3GB7ZBB8 358 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 NTN3O00634 580 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CBFA2T2O43439 604 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 SCP2P22307 547 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 RPA1P27694 616 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ARL2P36404 184 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 GRM5P41594 1212 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PNOCQ13519 176 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ARID5BQ14865 1188 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 DPCR1Q3MIW9 517 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 RRAGBQ5VZM2 374 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 HAUS3Q68CZ6 603 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PLA2G4FQ68DD2 849 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 CDCA2Q69YH5 1023 aaPredicted RBP6.97□□□□□ -1.29
CSTF3-201ENST00000323959 ZBTB8OSQ8IWT0 167 aa6.97□□□□□ -1.29
CSTF3-201ENST00000323959 PIBF1Q8WXW3 757 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms