RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 ALDH6A1Q02252 535 aaKnown RBP12.89□□□□□ -0.35
FN1-201ENST00000323926 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 CHP1Q99653 195 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 GGA3Q9NZ52 723 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 GAKO14976 1311 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 MLXIPLQ9NP71 852 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 GNPTGQ9UJJ9 305 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 PMPCBO75439 489 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SUPT7LO94864 414 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SERPINE1P05121 402 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SLC44A4Q53GD3 710 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 NT5DC3Q86UY8 548 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 RDH11Q8TC12 318 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 VPS28Q9UK41 221 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ATF5Q9Y2D1 282 aaPredicted RBP12.89□□□□□ -0.35
FN1-201ENST00000323926 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ESYT3A0FGR9 886 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 AMHP03971 560 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 MYBP10242 640 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 CD101Q93033 1021 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 PCDHA3Q9Y5H8 950 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 GSAPA4D1B5 854 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 CCDC154A6NI56 674 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 DNAJA2O60884 412 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ZNF112Q9UJU3 913 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.35
FN1-201ENST00000323926 ASGR1P07306 291 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 MZF1P28698 734 aaPredicted RBP12.89□□□□□ -0.35
FN1-201ENST00000323926 RPL9P32969 192 aaKnown RBP12.89□□□□□ -0.35
FN1-201ENST00000323926 IRAK1P51617 712 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SPATA17Q96L03 361 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 S100A13Q99584 98 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 PXMP2Q9NR77 195 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 PIKFYVEQ9Y2I7 2098 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ZNF23P17027 643 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 PPM1AP35813 382 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 PSMC6P62333 389 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
FN1-201ENST00000323926 CENPTQ96BT3 561 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 SMURF2Q9HAU4 748 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 ATP6V1HQ9UI12 483 aa12.89□□□□□ -0.35
FN1-201ENST00000323926 GP5P40197 560 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 KIAA0408Q6ZU52 694 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 RNFT2Q96EX2 444 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 CATSPER2Q96P56 530 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 HINFPQ9BQA5 517 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 KLHL31Q9H511 634 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 E9PBE3 544 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 PTPN4P29074 926 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 ENPEPQ07075 957 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 STK4Q13043 487 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 TTC27Q6P3X3 843 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 C10orf53Q8N6V4 93 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 SEZ6LQ9BYH1 1024 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 GRAP2O75791 330 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 PROSCO94903 275 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 EPN2O95208 641 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 MROH9Q5TGP6 573 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 L2HGDHQ9H9P8 463 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 SNX6Q9UNH7 406 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 SLC16A1P53985 500 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 YWHAZP63104 245 aaKnown RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 OLR1P78380 273 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 RASA2Q15283 850 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 PTGISQ16647 500 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 BEND7Q8N7W2 519 aaPredicted RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 WDR36Q8NI36 951 aaKnown RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 MRTO4Q9UKD2 239 aaKnown RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 SNAP91O60641 907 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 SERPINA4P29622 427 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 SERPINB5P36952 375 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 TROAPQ12815 778 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 PLCL1Q15111 1095 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 TMEM154Q6P9G4 183 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 ARCQ7LC44 396 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 KRT77Q7Z794 578 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 RUVBL2Q9Y230 463 aaKnown RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 RWDD3Q9Y3V2 267 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 PCDHGB3Q9Y5G1 929 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 COL1A2P08123 1366 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 NRCAMQ92823 1304 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 ZNHIT3Q15649 155 aaPredicted RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 DEPDC4Q8N2C3 294 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 ANKRD49Q8WVL7 239 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 TARS2Q9BW92 718 aaKnown RBP12.88□□□□□ -0.35
FN1-201ENST00000323926 PCDHB5Q9Y5E4 795 aa12.88□□□□□ -0.35
FN1-201ENST00000323926 NCK2O43639 380 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms