RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 UGT1A1P22309 533 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 UGT1A4P22310 534 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 UGT1A3P35503 534 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 UGT1A5P35504 534 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 HALP42357 657 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 TUFMP49411 452 aaKnown RBP7.21□□□□□ -1.25
SMC1A-201ENST00000322213 C1QBPQ07021 282 aaKnown RBP7.21□□□□□ -1.25
SMC1A-201ENST00000322213 KLRC3Q07444 240 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 CYP51A1Q16850 503 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 CLEC16AQ2KHT3 1053 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 GRTP1Q5TC63 336 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 PALB2Q86YC2 1186 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 NEDD1Q8NHV4 660 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 SLC20A1Q8WUM9 679 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 VPS33AQ96AX1 596 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 ACAD9Q9H845 621 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 UGT1A7Q9HAW7 530 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 UGT1A10Q9HAW8 530 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 UGT1A8Q9HAW9 530 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 ZFYVE28Q9HCC9 887 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 PI4KBQ9UBF8 816 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 SUGT1Q9Y2Z0 365 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 FAM237BA0A1B0GVD1 139 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 CCNKO75909 580 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 PEX2P28328 305 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 TPI1P60174 286 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 ARHGEF6Q15052 776 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 TRAPPC3LQ5T215 181 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 HAUS6Q7Z4H7 955 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 ZBTB33Q86T24 672 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 ATPAF2Q8N5M1 289 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 SERHL2Q9H4I8 314 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 POLR1BQ9H9Y6 1135 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 SERHLQ9NQF3 203 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 TMEM161AQ9NX61 479 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 GIT1Q9Y2X7 761 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 TBX22Q9Y458 520 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 SPEF1Q9Y4P9 236 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 SIPA1L1O43166 1804 aa7.21□□□□□ -1.25
SMC1A-201ENST00000322213 PTGES3LE9PB15 166 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 GLRA2P23416 452 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SLC26A3P40879 764 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ACLYP53396 1101 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SCRN3Q0VDG4 424 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 OTUD3Q5T2D3 398 aaPredicted RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 NOP9Q86U38 636 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ETNPPLQ8TBG4 499 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 PTCD3Q96EY7 689 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 INPP4AQ96PE3 977 aaPredicted RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SLC25A23Q9BV35 468 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 MGAMO43451 1857 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 EXTL3O43909 919 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 EDF1O60869 148 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 FAM20BO75063 409 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SMAD1Q15797 465 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 GALNTL6Q49A17 601 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ATP6AP1LQ52LC2 224 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 POC5Q8NA72 575 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 HIPK3Q9H422 1215 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 CCSER2Q9H7U1 834 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 LRRC4BQ9NT99 713 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 VANGL2Q9ULK5 521 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SBF2Q86WG5 1849 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TAF1LQ8IZX4 1826 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 DOCK4Q8N1I0 1966 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 CCDC154A6NI56 674 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ANXA6P08133 673 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 PRKAR1AP10644 381 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 GRIA3P42263 894 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SLC5A3P53794 718 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SQLEQ14534 574 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 COBLL1Q53SF7 1204 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TLDC1Q6P9B6 456 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 PDSS2Q86YH6 399 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 C12orf56Q8IXR9 622 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ACMSDQ8TDX5 336 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 NSMCE3Q96MG7 304 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 DNAJC18Q9H819 358 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TRPM7Q96QT4 1865 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 RCCD1A6NED2 376 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SEMA3DO95025 777 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 FKBP9O95302 570 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ILF2Q12905 390 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TWF2Q6IBS0 349 aaKnown RBP7.21□□□□□ -1.26
SMC1A-201ENST00000322213 GALNT18Q6P9A2 607 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 FOXR2Q6PJQ5 311 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 FKBP9P1Q75LS8 142 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TRABD2AQ86V40 505 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 DNAJC10Q8IXB1 793 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 HTRA1Q92743 480 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SLCO1B3Q9NPD5 702 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SIN3BO75182 1162 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 PHC1P78364 1004 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 RALGDSQ12967 914 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 TNFAIP1Q13829 316 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 ANO7Q6IWH7 933 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 SNX32Q86XE0 403 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 FAM9CQ8IZT9 166 aa7.21□□□□□ -1.26
SMC1A-201ENST00000322213 AHI1Q8N157 1196 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms