RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 A0A087X1B8 175 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 FOXN3O00409 490 aaPredicted RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 UQCRBP14927 111 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 QPRTQ15274 297 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CD302Q8IX05 232 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 TCP10LQ8TDR4 215 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 PYDC1Q8WXC3 89 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 STOML2Q9UJZ1 356 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CORO2BQ9UQ03 480 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 GLI1P08151 1106 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 FGFR3P22607 806 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 ACOX2Q99424 681 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 CCDC3Q9BQI4 270 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 RMI1Q9H9A7 625 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 DSEQ9UL01 958 aa17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 MYO18AQ92614 2054 aaKnown RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 ATXN2Q99700 1313 aaKnown RBP17.23■□□□□ 0.35
SMCHD1-201ENST00000320876 S100A6P06703 90 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 FBXO42Q6P3S6 717 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM220AQ7Z4H9 259 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 SH2D3AQ9BRG2 576 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 PCDHGA4Q9Y5G9 962 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 H3BQF6 201 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 C21orf2O43822 256 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ADRA2BP18089 450 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 SRP54P61011 504 aaKnown RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 AKAP14Q86UN6 197 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM92AA1XBS5 289 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 KHDRBS3O75525 346 aaKnown RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 SEC24AO95486 1093 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 PTSQ03393 145 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM172AQ8WUF8 416 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF222Q9UK12 451 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 AP4E1Q9UPM8 1137 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 DGCR6Q14129 220 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 SLC47A2Q86VL8 602 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 FBXO39Q8N4B4 442 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF75CPQ92670 426 aaPredicted RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 MXRA8Q9BRK3 442 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 RECQL5O94762 991 aaPredicted RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 PECAM1P16284 738 aaPredicted RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 FAM81AQ8TBF8 368 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 MTMR12Q9C0I1 747 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ARHGAP28Q9P2N2 729 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ALADP13716 330 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 HERVK_113P62684 666 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ITGB3BPQ13352 177 aaPredicted RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 CCNIQ14094 377 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF276Q8N554 614 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 SEMA6AQ9H2E6 1030 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 ABI2Q9NYB9 513 aaPredicted RBP17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 INVSQ9Y283 1065 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 CPT1AP50416 773 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 AP1S2P56377 157 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 GNA13Q14344 377 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 SBK1Q52WX2 424 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 OR56A4Q8NGH8 313 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 MID1IP1Q9NPA3 183 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 CCDC167Q9P0B6 97 aa17.22■□□□□ 0.35
SMCHD1-201ENST00000320876 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 HMGCS2P54868 508 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 POP5Q969H6 163 aaKnown RBP17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 MYL4P12829 197 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 PTDSS1P48651 473 aaKnown RBP17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 R3HDM2Q9Y2K5 976 aaKnown RBP17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 NR1H2P55055 460 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 ROR2Q01974 943 aaKnown RBP17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 CCDC36Q8IYA8 594 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 PJA1Q8NG27 643 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 CLN6Q9NWW5 311 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 AP1G2O75843 785 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 ZNF24P17028 368 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 HALP42357 657 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 ZKSCAN4Q969J2 545 aaPredicted RBP17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 SGPL1O95470 568 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 NPTXRO95502 500 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 CD151P48509 253 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 GMFBP60983 142 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 PYDC2Q56P42 97 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 MNTQ99583 582 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 NPY2RP49146 381 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 GPR15P49685 360 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 TMC2Q8TDI7 906 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 PLEKHG4BQ96PX9 1271 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 RPS6KA6Q9UK32 745 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 POLR1DQ9Y2S0 133 aa17.21■□□□□ 0.35
SMCHD1-201ENST00000320876 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms