RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 LSMEM2Q8N112 164 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
SYCN-201ENST00000318438 OR6B3Q8NGW1 331 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 PIWIL1Q96J94 861 aaKnown RBP13.82□□□□□ -0.2
SYCN-201ENST00000318438 GSDMAQ96QA5 445 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 EBF2Q9HAK2 575 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 GDF3Q9NR23 364 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 AASDHPPTQ9NRN7 309 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 KCNK4Q9NYG8 393 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 HOOK1Q9UJC3 728 aaKnown RBP13.82□□□□□ -0.2
SYCN-201ENST00000318438 FRMD4BQ9Y2L6 1034 aa13.82□□□□□ -0.2
SYCN-201ENST00000318438 A0A1W2PPC4 97 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 LRRIQ3A6PVS8 624 aaPredicted RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 MDM4O15151 490 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 YKT6O15498 198 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 STAU1O95793 577 aaKnown RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 AFPP02771 609 aaKnown RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 NR2F2P24468 414 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 ACP1P24666 158 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 ATICP31939 592 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 ARRB1P49407 418 aaPredicted RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 CASP4P49662 377 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 RPS14P62263 151 aaKnown RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 FYB2Q5VWT5 728 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 CCDC81Q6ZN84 652 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 Q6ZNB5 142 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 ANKS1BQ7Z6G8 1248 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 ELOA2Q8IYF1 753 aaPredicted RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 SPATA20Q8TB22 786 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 PLEKHO2Q8TD55 490 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 ZNF516Q92618 1163 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 SKA1Q96BD8 255 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 POLR1BQ9H9Y6 1135 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 THSD1Q9NS62 852 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 IL37Q9NZH6 218 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 CLEC4EQ9ULY5 219 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 MAPK8IP1Q9UQF2 711 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 PAXBP1Q9Y5B6 917 aa13.81□□□□□ -0.2
SYCN-201ENST00000318438 TP53BP1Q12888 1972 aaPredicted RBP13.81□□□□□ -0.2
SYCN-201ENST00000318438 PLXNA2O75051 1894 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 FAM92AA1XBS5 289 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 SMC2O95347 1197 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 RPL13P26373 211 aaKnown RBP13.8□□□□□ -0.2
SYCN-201ENST00000318438 LSSP48449 732 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 E2F1Q01094 437 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 GOLGA8FQ08AF8 430 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 GOLGA8DPQ0D2H9 430 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 TRPC3Q13507 836 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 PROX2Q3B8N5 592 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 LINC00303Q3SY05 128 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 CEP135Q66GS9 1140 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 KANSL1Q7Z3B3 1105 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 B3GALNT2Q8NCR0 500 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 TMC2Q8TDI7 906 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
SYCN-201ENST00000318438 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
SYCN-201ENST00000318438 XYLT2Q9H1B5 865 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 SGK2Q9HBY8 427 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 NUDT5Q9UKK9 219 aa13.8□□□□□ -0.2
SYCN-201ENST00000318438 A0A1W2PR77 199 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 IKBKBO14920 756 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 SIGLEC6O43699 453 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 SDC3O75056 442 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 PHACTR2O75167 634 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 DNTTP04053 509 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 CR2P20023 1033 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 CD38P28907 300 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 ATP5C1P36542 298 aaKnown RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 ANP32AP39687 249 aaKnown RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 TNNC1P63316 161 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 ARID5AQ03989 594 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 ENPEPQ07075 957 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 BIRC3Q13489 604 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 EIF4HQ15056 248 aaKnown RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 WDR72Q3MJ13 1102 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 ZNF658Q5TYW1 1059 aaPredicted RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 CDCP2Q5VXM1 449 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 INTS8Q75QN2 995 aaKnown RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 FAM35AQ86V20 835 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 SMYD4Q8IYR2 804 aaPredicted RBP13.79□□□□□ -0.2
SYCN-201ENST00000318438 CYB5D2Q8WUJ1 264 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 SMARCE1Q969G3 411 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 MED10Q9BTT4 135 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
SYCN-201ENST00000318438 A8MXQ7 604 aa13.78□□□□□ -0.2
SYCN-201ENST00000318438 TRIM38O00635 465 aa13.78□□□□□ -0.2
SYCN-201ENST00000318438 CSO75390 466 aaKnown RBP13.78□□□□□ -0.2
SYCN-201ENST00000318438 KLKB1P03952 638 aa13.78□□□□□ -0.2
SYCN-201ENST00000318438 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
SYCN-201ENST00000318438 ITGB6P18564 788 aa13.78□□□□□ -0.2
SYCN-201ENST00000318438 PSMC2P35998 433 aaKnown RBP13.78□□□□□ -0.2
SYCN-201ENST00000318438 NXPH1P58417 271 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms