RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ASB10Q8WXI3 467 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 FKBP10Q96AY3 582 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 FMNL2Q96PY5 1086 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 NOD2Q9HC29 1040 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PREBQ9HCU5 417 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 IRAK4Q9NWZ3 460 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 DKK2Q9UBU2 259 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 NRBP1Q9UHY1 535 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 VPS4AQ9UN37 437 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 LMTK3Q96Q04 1460 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 METP08581 1390 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PLEKHG1Q9ULL1 1385 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 USP32Q8NFA0 1604 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PLSCR1O15162 318 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 SPTLC2O15270 562 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 LARGE1O95461 756 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 LYL1P12980 280 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 ACP5P13686 325 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 RPL15P61313 204 aaKnown RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 E2F1Q01094 437 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 KCNJ12Q14500 433 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 TSTQ16762 297 aaKnown RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CTXN3Q4LDR2 81 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 ZNF276Q8N554 614 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 KCNG4Q8TDN1 519 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 DPCDQ9BVM2 203 aaPredicted RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PHF7Q9BWX1 381 aaPredicted RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 ZCWPW1Q9H0M4 648 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CEP72Q9P209 647 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 PI4KBQ9UBF8 816 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 NKX1-2Q9UD57 310 aaPredicted RBP4.48□□□□□ -1.69
SMCO3-201ENST00000316048 CNPY2Q9Y2B0 182 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 AFG3L2Q9Y4W6 797 aa4.48□□□□□ -1.69
SMCO3-201ENST00000316048 UBR1Q8IWV7 1749 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 A0A1W2PP64 1363 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 GAGE12BA1L429 117 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 FYB1O15117 783 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 PMPCBO75439 489 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 RTN3O95197 1032 aaPredicted RBP4.47□□□□□ -1.69
SMCO3-201ENST00000316048 PCSK6P29122 969 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 CTGFP29279 349 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 DCAF7P61962 342 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 VAMP2P63027 116 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 DCTN1Q14203 1278 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 KRT32Q14532 448 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 ACAD10Q6JQN1 1059 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 RNF125Q96EQ8 232 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 TRMT61AQ96FX7 289 aaKnown RBP4.47□□□□□ -1.69
SMCO3-201ENST00000316048 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
SMCO3-201ENST00000316048 NRDE2Q9H7Z3 1164 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 KCNK9Q9NPC2 374 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 FBXO28Q9NVF7 368 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 ANKFY1Q9P2R3 1169 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 FBXO2Q9UK22 296 aaPredicted RBP4.47□□□□□ -1.69
SMCO3-201ENST00000316048 RNF123Q5XPI4 1314 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 TECPR2O15040 1411 aa4.47□□□□□ -1.69
SMCO3-201ENST00000316048 A0A0G2JLL6 359 aaPredicted RBP4.46□□□□□ -1.69
SMCO3-201ENST00000316048 SLC16A3O15427 465 aaKnown RBP4.46□□□□□ -1.69
SMCO3-201ENST00000316048 GFPT2O94808 682 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 ITGB3P05106 788 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 GKP32189 559 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 R3HDM1Q15032 1099 aaKnown RBP4.46□□□□□ -1.69
SMCO3-201ENST00000316048 ANKRD1Q15327 319 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 ZNF569Q5MCW4 686 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 HAUS3Q68CZ6 603 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 MZT2BQ6NZ67 158 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 C16orf54Q6UWD8 224 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 CENPIQ92674 756 aaPredicted RBP4.46□□□□□ -1.69
SMCO3-201ENST00000316048 EXTL1Q92935 676 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 BDH2Q9BUT1 245 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 CLPBQ9H078 707 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 USP44Q9H0E7 712 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 DEF6Q9H4E7 631 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 JMJD4Q9H9V9 463 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 PARD6AQ9NPB6 346 aa4.46□□□□□ -1.69
SMCO3-201ENST00000316048 OLA1Q9NTK5 396 aaKnown RBP4.46□□□□□ -1.69
SMCO3-201ENST00000316048 C3P01024 1663 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 PLEKHH1Q9ULM0 1364 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 MED14O60244 1454 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 NRXN3Q9Y4C0 1643 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 PEX12O00623 359 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 KIAA0355O15063 1070 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 PRAMEF2O60811 474 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 ITGAMP11215 1152 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 CXCR5P32302 372 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 FOXL2P58012 376 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 TAS2R50P59544 299 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 RAE1P78406 368 aaKnown RBP4.46□□□□□ -1.7
SMCO3-201ENST00000316048 ITIH3Q06033 890 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMCO3-201ENST00000316048 UBAP2Q5T6F2 1119 aaKnown RBP4.46□□□□□ -1.7
SMCO3-201ENST00000316048 VWA1Q6PCB0 445 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.46□□□□□ -1.7
SMCO3-201ENST00000316048 SLC2A12Q8TD20 617 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 TFAP2BQ92481 460 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 RFKQ969G6 155 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 LOXL4Q96JB6 756 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 TEPSINQ96N21 525 aa4.46□□□□□ -1.7
SMCO3-201ENST00000316048 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms