RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 KBTBD6Q86V97 674 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 SEPT1Q8WYJ6 367 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 ATP2A3Q93084 1043 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 TBCBQ99426 244 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 CYP3A43Q9HB55 503 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 UBAP1Q9NZ09 502 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 TMEM216Q9P0N5 145 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 DCDC2Q9UHG0 476 aa13.82□□□□□ -0.2
SKA3-202ENST00000314759 IGKV6-21A0A0C4DH24 114 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 MYOCOSA0A1B0GUC4 107 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 DPYSL4O14531 572 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 MDM4O15151 490 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 DCXO43602 365 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 ATP9BO43861 1147 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 PFDN1O60925 122 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 MYL4P12829 197 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 GRK2P25098 689 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 STILQ15468 1287 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 GRAMD1BQ3KR37 738 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 PAOXQ6QHF9 649 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 SCUBE3Q8IX30 993 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 GCOM2Q9BZD3 368 aaPredicted RBP13.81□□□□□ -0.2
SKA3-202ENST00000314759 COPG2Q9UBF2 871 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 BARX2Q9UMQ3 279 aaPredicted RBP13.81□□□□□ -0.2
SKA3-202ENST00000314759 CCDC160A6NGH7 325 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 CASQ2O14958 399 aaPredicted RBP13.81□□□□□ -0.2
SKA3-202ENST00000314759 IMPDH2P12268 514 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 SDC4P31431 198 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 ABCE1P61221 599 aaKnown RBP13.81□□□□□ -0.2
SKA3-202ENST00000314759 GK3PQ14409 553 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 MAP3K21Q5TCX8 1036 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 KLHDC10Q6PID8 442 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 TMC7Q7Z402 723 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 HPDLQ96IR7 371 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 ZNF358Q9NW07 568 aa13.81□□□□□ -0.2
SKA3-202ENST00000314759 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 ZBTB14O43829 449 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 STAG3L1P0CL83 205 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 RALBP11234 206 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 HARS2P49590 506 aaKnown RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 ATXN1P54253 815 aaKnown RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 ITGA9Q13797 1035 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 LY6KQ17RY6 165 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 C12orf42Q96LP6 360 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 OXCT2Q9BYC2 517 aaPredicted RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 RNPEPQ9H4A4 650 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 AS3MTQ9HBK9 375 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 PACSIN3Q9UKS6 424 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 INPP5FQ9Y2H2 1132 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 MYO18AQ92614 2054 aaKnown RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 E2F8A0AVK6 867 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 CD1EP15812 388 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 MTTPP55157 894 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 SESN2P58004 480 aaPredicted RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 HPCAP84074 193 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 NADK2Q4G0N4 442 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 EEPD1Q7L9B9 569 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 ARNTL2Q8WYA1 636 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 CDKL2Q92772 493 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.2
SKA3-202ENST00000314759 FAM96AQ9H5X1 160 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 PICK1Q9NRD5 415 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 PEX1O43933 1283 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 TMCC1O94876 653 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 COX4I1P13073 169 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 ATP6V1B1P15313 513 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 ATICP31939 592 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 RGS2P41220 211 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 MBTD1Q05BQ5 628 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 INCA1Q0VD86 236 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 GOLGA7BQ2TAP0 167 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 HEATR6Q6AI08 1181 aaKnown RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 PLEKHG4BQ96PX9 1271 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 BTBD9Q96Q07 612 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 B3GNT5Q9BYG0 378 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
SKA3-202ENST00000314759 COG4Q9H9E3 785 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 IFT122Q9HBG6 1241 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 MTMR10Q9NXD2 777 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 PTTG2Q9NZH5 202 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 HESX1Q9UBX0 185 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 TNFSF13BQ9Y275 285 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 MFHAS1Q9Y4C4 1052 aa13.8□□□□□ -0.2
SKA3-202ENST00000314759 UTRNP46939 3433 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 A0A0J9YVX5 310 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 AP1G1O43747 822 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 GABBR2O75899 941 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 MGAT1P26572 445 aa13.79□□□□□ -0.2
SKA3-202ENST00000314759 PCSK6P29122 969 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms