RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ATF6P18850 670 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 MAGEA6P43360 314 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 MLLT6P55198 1093 aaPredicted RBP17.24■□□□□ 0.35
CLCF1-201ENST00000312438 TBX4P57082 545 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 NRG1Q02297 640 aaPredicted RBP17.24■□□□□ 0.35
CLCF1-201ENST00000312438 CBLBQ13191 982 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 EMC10Q5UCC4 262 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 ARHGEF18Q6ZSZ5 1173 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 SH2D3CQ8N5H7 860 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 SPATA13Q96N96 652 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 UBE2OQ9C0C9 1292 aaKnown RBP17.24■□□□□ 0.35
CLCF1-201ENST00000312438 SLC12A6Q9UHW9 1150 aa17.24■□□□□ 0.35
CLCF1-201ENST00000312438 TCEA3O75764 348 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 VAV1P15498 845 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 GAD2Q05329 585 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 EFEMP1Q12805 493 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 STAT4Q14765 748 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 ANKRD20A2Q5SQ80 823 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 FNBP1LQ5T0N5 605 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 ANKRD20A1Q5TYW2 823 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 ANKRD20A3Q5VUR7 823 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 RWDD4Q6NW29 188 aaKnown RBP17.23■□□□□ 0.35
CLCF1-201ENST00000312438 PYROXD1Q8WU10 500 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 CATSPERBQ9H7T0 1116 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 LRRC4CQ9HCJ2 640 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 PSD3Q9NYI0 1048 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 STK39Q9UEW8 545 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 NOVA2Q9UNW9 492 aaKnown RBP17.23■□□□□ 0.35
CLCF1-201ENST00000312438 VWA8A3KMH1 1905 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 MICAL3Q7RTP6 2002 aa17.23■□□□□ 0.35
CLCF1-201ENST00000312438 A0A087WUV0 522 aaPredicted RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 RGS16O15492 202 aaPredicted RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 FGF10O15520 208 aaPredicted RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 OPHN1O60890 802 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 METTL18O95568 372 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 FGBP02675 491 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 HOXC13P31276 330 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 PPM1AP35813 382 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 FDFT1P37268 417 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 PPIGQ13427 754 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 TRIP4Q15650 581 aaPredicted RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 LZTR1Q8N653 840 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 TBC1D31Q96DN5 1066 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 CDK5RAP1Q96SZ6 601 aaKnown RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 MARCH2Q9P0N8 246 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 PRKAG2Q9UGJ0 569 aa17.22■□□□□ 0.35
CLCF1-201ENST00000312438 ZMYND8Q9ULU4 1186 aaPredicted RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 MAGED2Q9UNF1 606 aaPredicted RBP17.22■□□□□ 0.35
CLCF1-201ENST00000312438 MTSS1O43312 755 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 TBX18O95935 607 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 APOEP02649 317 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 URODP06132 367 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 KPNA1P52294 538 aaPredicted RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 PPIDQ08752 370 aaKnown RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 GALNT2Q10471 571 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 RAB33AQ14088 237 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 FASTKD3Q14CZ7 662 aaKnown RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 C10orf120Q5SQS8 335 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 ACBD5Q5T8D3 534 aaPredicted RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MANEALQ5VSG8 457 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 CCDC13Q8IYE1 715 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 GPR65Q8IYL9 337 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 ZNF276Q8N554 614 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 NPWQ8N729 165 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 NETO2Q8NC67 525 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MCUQ8NE86 351 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 PDZD8Q8NEN9 1154 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 EPS8L3Q8TE67 593 aaKnown RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 OVCA2Q8WZ82 227 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 HDAC11Q96DB2 347 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 STMN4Q9H169 189 aaPredicted RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 HS3ST4Q9Y661 456 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 A6NNZ2 444 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 ZBBXA8MT70 800 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 E7EVH7 732 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 SEC24AO95486 1093 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MOCS2O96007 188 aaPredicted RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 IVLP07476 585 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 APRTP07741 180 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 CSH1P0DML2 217 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 CSH2P0DML3 217 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 TSHRP16473 764 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 NR1D1P20393 614 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 TUBP50607 506 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MTA1Q13330 715 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 SEMA5AQ13591 1074 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 AUHQ13825 339 aaKnown RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 BBS9Q3SYG4 887 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 TUBB8Q3ZCM7 444 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 MSS51Q4VC12 460 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 HP1BP3Q5SSJ5 553 aaPredicted RBP17.21■□□□□ 0.35
CLCF1-201ENST00000312438 SNX30Q5VWJ9 437 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 KDM7AQ6ZMT4 941 aa17.21■□□□□ 0.35
CLCF1-201ENST00000312438 TADA2BQ86TJ2 420 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms