RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 BORCS5Q969J3 196 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 SQORQ9Y6N5 450 aa18.52■□□□□ 0.55
SPSB4-201ENST00000310546 C3orf70A6NLC5 250 aaPredicted RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 OXSR1O95747 527 aaPredicted RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 GSRP00390 522 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 MMP8P22894 467 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 ARRB2P32121 409 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 CLCN2P51788 898 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 SMAD1Q15797 465 aaKnown RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 NANOGP8Q6NSW7 305 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 SLC2A7Q6PXP3 512 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 MIER3Q7Z3K6 550 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 C10orf107Q8IVU9 208 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 FAM156AQ8NDB6 213 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF516Q92618 1163 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 CALN1Q9BXU9 219 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 PCSK1NQ9UHG2 260 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 STX16-NPEPL1H3BU86 382 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 RNASEH2AO75792 299 aaKnown RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 ENO3P13929 434 aaPredicted RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 PTPN7P35236 360 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 PRAMEP78395 509 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 CTBSQ01459 385 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF829Q3KNS6 432 aaPredicted RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 FSCBQ5H9T9 825 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 BNC2Q6ZN30 1099 aaPredicted RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 GPR180Q86V85 440 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 SNX32Q86XE0 403 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 DSELQ8IZU8 1212 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 PDCD6IPQ8WUM4 868 aaKnown RBP18.51■□□□□ 0.55
SPSB4-201ENST00000310546 TMEM174Q8WUU8 243 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 SORT1Q99523 831 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 COQ10BQ9H8M1 238 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 CCPG1Q9ULG6 757 aa18.51■□□□□ 0.55
SPSB4-201ENST00000310546 E2F8A0AVK6 867 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 ADM5C9JUS6 153 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 H3BNH8 94 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 GIPC1O14908 333 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 APRTP07741 180 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 MAPTP10636 758 aaKnown RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF12P17014 697 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF26P17031 533 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 UGT1A6P19224 532 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 UGT1A1P22309 533 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 UGT1A4P22310 534 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 IL1R2P27930 398 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 UGT1A3P35503 534 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 UGT1A5P35504 534 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 KPNA1P52294 538 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 C6orf183Q5T699 404 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 NPNTQ6UXI9 565 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 BBS12Q6ZW61 710 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 UBR7Q8N806 425 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 TMC2Q8TDI7 906 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 KLHL32Q96NJ5 620 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 RNPEPQ9H4A4 650 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 COG4Q9H9E3 785 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 OLAHQ9NV23 265 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 DNAJC28Q9NX36 388 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 GOLGA8QA0A0J9YX86 632 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 GOLGA8OA6NCC3 632 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 WDR64B1ANS9 1081 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 GOLGA8NF8WBI6 632 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 J3QRK9 145 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 HLA-DRAP01903 254 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 TNFAIP1Q13829 316 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 TMEM126BQ8IUX1 230 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 KYQ8NBH2 561 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 KCNN1Q92952 543 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 FBXL8Q96CD0 374 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 PGBD4Q96DM1 585 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 MFSD14AQ96MC6 490 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 GPRC5DQ9NZD1 345 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 RBMX2Q9Y388 322 aaKnown RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 PIK3R2O00459 728 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 ATE1O95260 518 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 MYL4P12829 197 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 SP4Q02446 784 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 MGAT5BQ3V5L5 792 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 ZNF394Q53GI3 561 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 PLAC1Q9HBJ0 212 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 POPDC2Q9HBU9 364 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 AFG3L2Q9Y4W6 797 aa18.5■□□□□ 0.55
SPSB4-201ENST00000310546 CTDP1Q9Y5B0 961 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 GPC6Q9Y625 555 aaPredicted RBP18.5■□□□□ 0.55
SPSB4-201ENST00000310546 HNRNPDLO14979 420 aaKnown RBP18.49■□□□□ 0.55
SPSB4-201ENST00000310546 APOEP02649 317 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 SERPINE1P05121 402 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 ACO1P21399 889 aaKnown RBP18.49■□□□□ 0.55
SPSB4-201ENST00000310546 OSBPP22059 807 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 PSMA2P25787 234 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 GABRB2P47870 512 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 CEACAM7Q14002 265 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 KCNJ11Q14654 390 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 HOMEZQ8IX15 550 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 SLC7A5P1Q8MH63 180 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 KCTD6Q8NC69 237 aa18.49■□□□□ 0.55
SPSB4-201ENST00000310546 DEPDC1BQ8WUY9 529 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms