RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ARHGAP18Q8N392 663 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 NPWQ8N729 165 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 COLGALT1Q8NBJ5 622 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 BCL7CQ8WUZ0 217 aaPredicted RBP21.9■■□□□ 1.1
ATG4D-201ENST00000309469 TTPALQ9BTX7 342 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 ACSS3Q9H6R3 686 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 SEPT10Q9P0V9 454 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 NUDT5Q9UKK9 219 aa21.9■■□□□ 1.1
ATG4D-201ENST00000309469 TTC3P53804 2025 aa21.89■■□□□ 1.1
ATG4D-201ENST00000309469 MTMR11A4FU01 709 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 MSI1O43347 362 aaKnown RBP21.89■■□□□ 1.09
ATG4D-201ENST00000309469 UPP2O95045 317 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 CREB1P16220 341 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 GEMIN4P57678 1058 aaKnown RBP21.89■■□□□ 1.09
ATG4D-201ENST00000309469 SMARCB1Q12824 385 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 NR1H3Q13133 447 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 PPP2R5DQ14738 602 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 ANKS3Q6ZW76 656 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 SPPL2BQ8TCT7 592 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 XPO6Q96QU8 1125 aaKnown RBP21.89■■□□□ 1.09
ATG4D-201ENST00000309469 OXCT2Q9BYC2 517 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-201ENST00000309469 BRD8Q9H0E9 1235 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 SIK2Q9H0K1 926 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 SLC27A5Q9Y2P5 690 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 TET1Q8NFU7 2136 aa21.89■■□□□ 1.09
ATG4D-201ENST00000309469 PAGE1O75459 146 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 SERPINB6P35237 376 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 IKBKEQ14164 716 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 KLHL38Q2WGJ6 581 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 RNF19BQ6ZMZ0 732 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 GPR152Q8TDT2 470 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 SERPINB11Q96P15 392 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 INTS9Q9NV88 658 aaKnown RBP21.88■■□□□ 1.09
ATG4D-201ENST00000309469 TMEM51Q9NW97 253 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 TBX21Q9UL17 535 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 ACTL7BQ9Y614 415 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 TANC1Q9C0D5 1861 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 VWA8A3KMH1 1905 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 SCN5AQ14524 2016 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 FAM92AA1XBS5 289 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 GMNCA6NCL1 334 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 SPAG6O75602 509 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 SOAT2O75908 522 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 SRGAP2BP0DMP2 458 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 BRAFP15056 766 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 MX2P20592 715 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 MAGEA3P43357 314 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 PPIDQ08752 370 aaKnown RBP21.88■■□□□ 1.09
ATG4D-201ENST00000309469 GALNT2Q10471 571 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 PARP6Q2NL67 630 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 MSANTD2Q6P1R3 559 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 ZNF534Q76KX8 674 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 ZNF567Q8N184 647 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 ATXN2LQ8WWM7 1075 aaKnown RBP21.88■■□□□ 1.09
ATG4D-201ENST00000309469 LRRC39Q96DD0 335 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 CEP41Q9BYV8 373 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 GMIPQ9P107 970 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 RSPH14Q9UHP6 348 aa21.88■■□□□ 1.09
ATG4D-201ENST00000309469 NDUFAB1O14561 156 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 VNN2O95498 520 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 YWHAQP27348 245 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 ALDH7A1P49419 539 aaKnown RBP21.87■■□□□ 1.09
ATG4D-201ENST00000309469 CDK16Q00536 496 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 MGAT5BQ3V5L5 792 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 CNKSR3Q6P9H4 555 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 NLRP14Q86W24 1093 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 SRRM1Q8IYB3 904 aaKnown RBP21.87■■□□□ 1.09
ATG4D-201ENST00000309469 MRRFQ96E11 262 aaKnown RBP21.87■■□□□ 1.09
ATG4D-201ENST00000309469 CRISPLD1Q9H336 500 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 XAB2Q9HCS7 855 aaKnown RBP21.87■■□□□ 1.09
ATG4D-201ENST00000309469 PSMC3IPQ9P2W1 217 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-201ENST00000309469 ATP11BQ9Y2G3 1177 aa21.87■■□□□ 1.09
ATG4D-201ENST00000309469 TMEM120BA0PK00 339 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 KCNU1A8MYU2 1149 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 RASA4BC9J798 803 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 KCNK1O00180 336 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 RASA4O43374 803 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 RTN3O95197 1032 aaPredicted RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 HAPLN1P10915 354 aaPredicted RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 HTR7P34969 479 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 SARNPP82979 210 aaKnown RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 EFTUD2Q15029 972 aaKnown RBP eCLIP21.86■■□□□ 1.093e-7■■□□□ 12.2
ATG4D-201ENST00000309469 RWDD4Q6NW29 188 aaKnown RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 PRSS55Q6UWB4 352 aaPredicted RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 DIS3LQ8TF46 1054 aaKnown RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 C2orf15Q8WU43 125 aaKnown RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 HDAC11Q96DB2 347 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 SPATA17Q96L03 361 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 SEPT5Q99719 369 aaPredicted RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 DHRS4Q9BTZ2 278 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 KCNK9Q9NPC2 374 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 TMEM39AQ9NV64 488 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 NEU3Q9UQ49 428 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 CCT5P48643 541 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 PID1Q7Z2X4 250 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 TRABD2AQ86V40 505 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 FBXO32Q969P5 355 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 FCRL2Q96LA5 508 aaPredicted RBP21.86■■□□□ 1.09
ATG4D-201ENST00000309469 CCT8L2Q96SF2 557 aa21.86■■□□□ 1.09
ATG4D-201ENST00000309469 CYTH2Q99418 400 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms