RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NTHL1P78549 312 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TRIM14Q14142 442 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ARID5BQ14865 1188 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TAF12Q16514 161 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SLC5A9Q2M3M2 681 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SETMARQ53H47 684 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 CXorf57Q6NSI4 855 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 PMF1Q6P1K2 205 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TMCO3Q6UWJ1 677 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 PDZD4Q76G19 769 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 PIGZQ86VD9 579 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 WDTC1Q8N5D0 677 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SCAMP5Q8TAC9 235 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 UBA3Q8TBC4 463 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 NAF1Q96HR8 494 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 HSFY1Q96LI6 401 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 PHF7Q9BWX1 381 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 FBXO44Q9H4M3 255 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ZNF334Q9HCZ1 680 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.58□□□□□ -1.04
CHD6-201ENST00000309279 AK5Q9Y6K8 562 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TRIOO75962 3097 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 M0QYV0 167 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 MASP2O00187 686 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 NRG2O14511 850 aaPredicted RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 DKK1O94907 266 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 CYP1A2P05177 515 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 ZDHHC11BP0C7U3 371 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 IMPDH2P12268 514 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 IL9P15248 144 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 FSHRP23945 695 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 YWHAQP27348 245 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 CDC25CP30307 473 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 HNRNPH3P31942 346 aaKnown RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 CASP14P31944 242 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 PRKCIP41743 596 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 PPP3CCP48454 512 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 KCNQ1P51787 676 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 CDR2Q01850 454 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SFMBT2Q5VUG0 894 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SNX30Q5VWJ9 437 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 PM20D1Q6GTS8 502 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 DENND1BQ6P3S1 775 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 GPRIN1Q7Z2K8 1008 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 TMEM110Q86TL2 294 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 CCDC116Q8IYX3 515 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 NRSN1Q8IZ57 195 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SCML4Q8N228 414 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SYNPOQ8N3V7 929 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 STKLD1Q8NE28 680 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 ZNF397Q8NF99 534 aaPredicted RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 ITFG1Q8TB96 612 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SHKBP1Q8TBC3 707 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 THAP3Q8WTV1 239 aaPredicted RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 OVCA2Q8WZ82 227 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 TCEAL4Q96EI5 215 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 DESI2Q9BSY9 194 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SYT11Q9BT88 431 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 YIPF2Q9BWQ6 316 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SLC4A5Q9BY07 1137 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 PAPOLBQ9NRJ5 636 aaKnown RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 ARGLU1Q9NWB6 273 aaPredicted RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 GDE1Q9NZC3 331 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 PRKAG3Q9UGI9 489 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 SCML2Q9UQR0 700 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 ZFP37Q9Y6Q3 630 aaPredicted RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 MYO10Q9HD67 2058 aa8.57□□□□□ -1.04
CHD6-201ENST00000309279 TCF20Q9UGU0 1960 aaKnown RBP8.57□□□□□ -1.04
CHD6-201ENST00000309279 SYNJ2BP-COX16A0A087WUM0 186 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 A0A1W2PRU2 124 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 ZNF840PA6NDX5 716 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 PDPK1O15530 556 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 TADA3O75528 432 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 GABBR2O75899 941 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 LSM8O95777 96 aaKnown RBP8.56□□□□□ -1.04
CHD6-201ENST00000309279 PYGLP06737 847 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 MYL4P12829 197 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 ZNF24P17028 368 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 CHRNB2P17787 502 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 GABRR2P28476 465 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 FMO1Q01740 532 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 TAF10Q12962 218 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 GRM3Q14832 879 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 SLC45A4Q5BKX6 768 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 E4F1Q66K89 784 aaPredicted RBP8.56□□□□□ -1.04
CHD6-201ENST00000309279 HGSNATQ68CP4 663 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 RETSATQ6NUM9 610 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 POTEHQ6S545 545 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 CCDC186Q7Z3E2 898 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 SPATS2Q86XZ4 545 aaKnown RBP8.56□□□□□ -1.04
CHD6-201ENST00000309279 GALNT13Q8IUC8 556 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 OLIG1Q8TAK6 271 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 CPLX3Q8WVH0 158 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 FGF13Q92913 245 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 NINJ1Q92982 152 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 SLITRK1Q96PX8 696 aa8.56□□□□□ -1.04
CHD6-201ENST00000309279 TACO1Q9BSH4 297 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms