RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 SERPINB12Q96P63 405 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 HAPLN3Q96S86 360 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 EPAS1Q99814 870 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 VN1R3Q9BXE9 311 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 KLC2Q9H0B6 622 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 CRISPLD1Q9H336 500 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 RC3H2Q9HBD1 1191 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 RAB6BQ9NRW1 208 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 COMMD8Q9NX08 183 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 OSER1Q9NX31 292 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 MTRRQ9UBK8 725 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 XPO7Q9UIA9 1087 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 NOVA2Q9UNW9 492 aaKnown RBP12.26□□□□□ -0.45
TRIM40-205ENST00000307859 BACE2Q9Y5Z0 518 aa12.26□□□□□ -0.45
TRIM40-205ENST00000307859 DENND4CQ5VZ89 1909 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 PLXNA4Q9HCM2 1894 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 PPP1R12AO14974 1030 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 GPR37L1O60883 481 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 LRIG2O94898 1065 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 RTN3O95197 1032 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 AGTP01019 485 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 HTR7P34969 479 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 USP46P62068 366 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 PDIA2Q13087 525 aaKnown RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 AUHQ13825 339 aaKnown RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 STAT4Q14765 748 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 AAK1Q2M2I8 961 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 USP41Q3LFD5 358 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 FNBP1LQ5T0N5 605 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 SLC8B1Q6J4K2 584 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 PRSS55Q6UWB4 352 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 PPP1R21Q6ZMI0 780 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 DENND5BQ6ZUT9 1274 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 PDZD4Q76G19 769 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 ARFGAP2Q8N6H7 521 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 STKLD1Q8NE28 680 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 CCDC110Q8TBZ0 833 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 LRRN4Q8WUT4 740 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 HTR3CQ8WXA8 447 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 TOP1MTQ969P6 601 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 ZNF689Q96CS4 500 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 IGSF21Q96ID5 467 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 SERPINB11Q96P15 392 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 FRMD8Q9BZ67 464 aaPredicted RBP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 GMIPQ9P107 970 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 BCCIPQ9P287 314 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM40-205ENST00000307859 OR12D3Q9UGF7 316 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 NEU3Q9UQ49 428 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 CHD5Q8TDI0 1954 aa12.25□□□□□ -0.45
TRIM40-205ENST00000307859 BDP1A6H8Y1 2624 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 A0A087WUV0 522 aaPredicted RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 A0A0A0MRY4 1105 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 A6NNZ2 444 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 GOLGA8MH3BSY2 632 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 RGS16O15492 202 aaPredicted RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 TIMP1P01033 207 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 IVLP07476 585 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 YWHAQP27348 245 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 HOXC13P31276 330 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 CCR1P32246 355 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 LMAN1P49257 510 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 ARPP19P56211 112 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 MAGOHP61326 146 aaKnown RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 NRG1Q02297 640 aaPredicted RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 MGAT5BQ3V5L5 792 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 TUBB8Q3ZCM7 444 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 MSS51Q4VC12 460 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 ARTNQ5T4W7 220 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 MANEALQ5VSG8 457 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 CCDC13Q8IYE1 715 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 ZBED8Q8IZ13 594 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 PDIK1LQ8N165 341 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 TAB3Q8N5C8 712 aaPredicted RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 MCUQ8NE86 351 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 RNF34Q969K3 372 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 CEP295NLQ96MC4 621 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 SPATA13Q96N96 652 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 LGMNQ99538 433 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 WDR83Q9BRX9 315 aaKnown RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 STMN4Q9H169 189 aaPredicted RBP12.24□□□□□ -0.45
TRIM40-205ENST00000307859 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 EURLQ9NYK6 297 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 CLIC5Q9NZA1 410 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 SFMBT1Q9UHJ3 866 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 SNX10Q9Y5X0 201 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 CLUHO75153 1309 aa12.24□□□□□ -0.45
TRIM40-205ENST00000307859 TLDC2A0PJX2 215 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 KCNU1A8MYU2 1149 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 NCAM2O15394 837 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 MSI1O43347 362 aaKnown RBP12.23□□□□□ -0.45
TRIM40-205ENST00000307859 OPHN1O60890 802 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 EFCAB14O75071 495 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 BANF1O75531 89 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 SOAT2O75908 522 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 TSHRP16473 764 aa12.23□□□□□ -0.45
TRIM40-205ENST00000307859 TPSB2P20231 275 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms