RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DGKZQ13574 1117 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 KPNB1Q14974 876 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 ZNF470Q6ECI4 717 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 JADE3Q92613 823 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 ACTR8Q9H981 624 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 EXOSC4Q9NPD3 245 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 RGS18Q9NS28 235 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 UTP6Q9NYH9 597 aaKnown RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 PDP2Q9P2J9 529 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 VTI1BQ9UEU0 232 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 POLG2Q9UHN1 485 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 MYPNQ86TC9 1320 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 A0A096LPK6 155 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 MGAT4DA6NG13 374 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 SPATA31C1P0DKV0 1188 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 CHI3L1P36222 383 aaPredicted RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 PCBP1Q15365 356 aaKnown RBP eCLIP16.3■□□□□ 0.2
USP42-201ENST00000306177 PLPPR4Q7Z2D5 763 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 WNT8BQ93098 351 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 PHF21AQ96BD5 680 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 COPS7BQ9H9Q2 264 aaPredicted RBP16.3■□□□□ 0.2
USP42-201ENST00000306177 ABCC13Q9NSE7 274 aa16.3■□□□□ 0.2
USP42-201ENST00000306177 BTNL10A8MVZ5 291 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 WDR47O94967 919 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 VAPBO95292 243 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 PTPN1P18031 435 aaKnown RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 HALP42357 657 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 NMRAL1Q9HBL8 299 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 PIH1D1Q9NWS0 290 aaKnown RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 IMPAD1Q9NX62 359 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 GPC1P35052 558 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 GRK3P35626 688 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 BTG3Q14201 252 aaPredicted RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 PGS1Q32NB8 556 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 LGI2Q8N0V4 545 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 LNX1Q8TBB1 728 aaPredicted RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 ADAM2Q99965 735 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 STN1Q9H668 368 aaKnown RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 UXTQ9UBK9 157 aaPredicted RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 TSPAN3O60637 253 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 ZNF7P17097 686 aaPredicted RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 IFI35P80217 286 aaPredicted RBP16.29■□□□□ 0.2
USP42-201ENST00000306177 MMRN1Q13201 1228 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 AGKQ53H12 422 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 SCARA3Q6AZY7 606 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 ERAP2Q6P179 960 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 PHF21BQ96EK2 531 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 NCANO14594 1321 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 DAB1O75553 588 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 NFICP08651 508 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 PARP6Q2NL67 630 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 DEPDC1Q5TB30 811 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 TAS2R13Q9NYV9 303 aa16.29■□□□□ 0.2
USP42-201ENST00000306177 FKBP6O75344 327 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
USP42-201ENST00000306177 CAPSQ13938 189 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 NR6A1Q15406 480 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 FOXR2Q6PJQ5 311 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 TADA1Q96BN2 335 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
USP42-201ENST00000306177 UNKQ9C0B0 810 aaKnown RBP16.28■□□□□ 0.2
USP42-201ENST00000306177 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 hCG_2014768A0A024R1R8 64 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 GNG14A0A1W2PPG7 69 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 KRT87PA6NCN2 255 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
USP42-201ENST00000306177 KRT6AP02538 564 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 KRT6BP04259 564 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 KRT6CP48668 564 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 PCYT1AP49585 367 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 CDK7P50613 346 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 BMT2Q1RMZ1 405 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 ZNF786Q8N393 782 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 FBXO39Q8N4B4 442 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 ACOX2Q99424 681 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 TBC1D23Q9NUY8 699 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 ETNK2Q9NVF9 386 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 SPATA31C2B4DYI2 1134 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 EPHB6O15197 1021 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 FAAP100Q0VG06 881 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 SLC45A4Q5BKX6 768 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 KYQ8NBH2 561 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 HSFY1Q96LI6 401 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 SMPD4Q9NXE4 827 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 MPP6Q9NZW5 540 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 WEE1P30291 646 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 CYP2C18P33260 490 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 SHROOM1Q2M3G4 852 aaPredicted RBP16.28■□□□□ 0.2
USP42-201ENST00000306177 TRMT5Q32P41 509 aaKnown RBP16.28■□□□□ 0.2
USP42-201ENST00000306177 MICU2Q8IYU8 434 aa16.28■□□□□ 0.2
USP42-201ENST00000306177 SHC3Q92529 594 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms