RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PRICKLE1Q96MT3 831 aaPredicted RBP25.3■■□□□ 1.64
HOXC9-201ENST00000303450 RPRD1AQ96P16 312 aaPredicted RBP25.3■■□□□ 1.64
HOXC9-201ENST00000303450 XPO6Q96QU8 1125 aaKnown RBP25.3■■□□□ 1.64
HOXC9-201ENST00000303450 COL25A1Q9BXS0 654 aaPredicted RBP25.3■■□□□ 1.64
HOXC9-201ENST00000303450 MACROD2A1Z1Q3 448 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 KRT86O43790 486 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 BUB1BO60566 1050 aaPredicted RBP25.29■■□□□ 1.64
HOXC9-201ENST00000303450 TBL1XO60907 577 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 SRGAP2O75044 1071 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 TCF4P15884 667 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 SGSHP51688 502 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 RPS24P62847 133 aaKnown RBP25.29■■□□□ 1.64
HOXC9-201ENST00000303450 BOLA3Q53S33 107 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 C1orf228Q6PIY5 440 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 C14orf80Q86SX3 495 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 CFAP52Q8N1V2 620 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 TPCN2Q8NHX9 752 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 MYEOVQ96EZ4 313 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 SHDQ96IW2 340 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 SNRNP25Q9BV90 132 aaKnown RBP25.29■■□□□ 1.64
HOXC9-201ENST00000303450 ZWILCHQ9H900 591 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 STIM2Q9P246 746 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 TRIM10Q9UDY6 481 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 AP4E1Q9UPM8 1137 aa25.29■■□□□ 1.64
HOXC9-201ENST00000303450 IL1R2P27930 398 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 SLC1A1P43005 524 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 IFI16Q16666 785 aaKnown RBP25.28■■□□□ 1.64
HOXC9-201ENST00000303450 GAB4Q2WGN9 574 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 MPP7Q5T2T1 576 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 CPNE8Q86YQ8 564 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 P2RY11Q96G91 374 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 MAGEB5Q9BZ81 275 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 PPP2R2CQ9Y2T4 447 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 TRIOO75962 3097 aa25.28■■□□□ 1.64
HOXC9-201ENST00000303450 KRBA1A5PL33 1030 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 E9PAM4 449 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 TNFRSF10AO00220 468 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 MAN2B1O00754 1011 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 CACNG3O60359 315 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 HOXD9P28356 352 aaPredicted RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 SLC25A11Q02978 314 aaKnown RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 SMTNL2Q2TAL5 461 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 KCNT1Q5JUK3 1230 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 TTC39BQ5VTQ0 682 aaPredicted RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 DAAM2Q86T65 1068 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 PSTKQ8IV42 348 aaKnown RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 IGSF8Q969P0 613 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 EXOC4Q96A65 974 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 CHFRQ96EP1 664 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 DHX35Q9H5Z1 703 aaKnown RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 GPATCH2LQ9NWQ4 482 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 PI4K2BG5E9Z4 385 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 NRG1Q02297 640 aaPredicted RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 C11orf63Q6NUN7 778 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 TXNDC11Q6PKC3 985 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 ZNF852Q6ZMS4 543 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 TRIM67Q6ZTA4 783 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 CYP4V2Q6ZWL3 525 aaPredicted RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 C12orf40Q86WS4 652 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 PYROXD2Q8N2H3 581 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 FAM3CQ92520 227 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 DNAJC17Q9NVM6 304 aaKnown RBP25.27■■□□□ 1.64
HOXC9-201ENST00000303450 GUCA1BQ9UMX6 200 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 ALG6Q9Y672 507 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 COL4A3Q01955 1670 aa25.27■■□□□ 1.64
HOXC9-201ENST00000303450 FAM72CH0Y354 149 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 SPOPO43791 374 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 TULP3O75386 442 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 COMTP21964 271 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 L1CAMP32004 1257 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 GJC1P36383 396 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 OPRD1P41143 372 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 EIF2DP41214 584 aaKnown RBP25.26■■□□□ 1.63
HOXC9-201ENST00000303450 SLC6A11P48066 632 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 FAM72AQ5TYM5 149 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 FAM72DQ6L9T8 149 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 FAM72BQ86X60 149 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 CCDC117Q8IWD4 279 aaPredicted RBP25.26■■□□□ 1.63
HOXC9-201ENST00000303450 ETFBKMTQ8IXQ9 262 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 ZNF683Q8IZ20 524 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 RNF10Q8N5U6 811 aaKnown RBP25.26■■□□□ 1.63
HOXC9-201ENST00000303450 HSPH1Q92598 858 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 CD101Q93033 1021 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 P2RY13Q9BPV8 354 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 DEC1Q9P2X7 70 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 HYOU1Q9Y4L1 999 aa25.26■■□□□ 1.63
HOXC9-201ENST00000303450 MUC3AQ02505 3323 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.25■■□□□ 1.63
HOXC9-201ENST00000303450 CREB3O43889 395 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 KRT7P08729 469 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 RARAP10276 462 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 CD72P21854 359 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 STARD6P59095 220 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 TAS2R40P59535 323 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 CA9Q16790 459 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 C5orf22Q49AR2 442 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 NAIF1Q69YI7 327 aaPredicted RBP25.25■■□□□ 1.63
HOXC9-201ENST00000303450 TXNRD3NBQ6F5E7 133 aa25.25■■□□□ 1.63
HOXC9-201ENST00000303450 RWDD4Q6NW29 188 aaKnown RBP25.25■■□□□ 1.63
HOXC9-201ENST00000303450 ZNF662Q6ZS27 426 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms