RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ARHGEF18Q6ZSZ5 1173 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 ZNF771Q7L3S4 317 aaPredicted RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 FBXO32Q969P5 355 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 ZNF689Q96CS4 500 aaPredicted RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 SLC12A6Q9UHW9 1150 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 NEU3Q9UQ49 428 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 E7EVH7 732 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 RNF103O00237 685 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 APRTP07741 180 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 SRGAP2BP0DMP2 458 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 CSF2RAP15509 400 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 MDH1P40925 334 aaKnown RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 DEFB103AP81534 67 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 WASHC5Q12768 1159 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 RASIP1Q5U651 963 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 SLC8B1Q6J4K2 584 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 FAM117BQ6P1L5 589 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 CAND1Q86VP6 1230 aaKnown RBP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 AGGF1Q8N302 714 aaeCLIP22.96■■□□□ 1.27
SMAD1-201ENST00000302085 SERPINB11Q96P15 392 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 PCDH10Q9P2E7 1040 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 BACE2Q9Y5Z0 518 aa22.96■■□□□ 1.27
SMAD1-201ENST00000302085 WDR27A2RRH5 827 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 GCAP28676 217 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 SSTR1P30872 391 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 ELK3P41970 407 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 DMTNQ08495 405 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 TAF10Q12962 218 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 CYP4X1Q8N118 509 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 MCUQ8NE86 351 aa22.95■■□□□ 1.26
SMAD1-201ENST00000302085 FCRL2Q96LA5 508 aaPredicted RBP22.95■■□□□ 1.26
SMAD1-201ENST00000302085 STMN4Q9H169 189 aaPredicted RBP22.95■■□□□ 1.26
SMAD1-201ENST00000302085 IVLP07476 585 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 OR1D2P34982 312 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 RPL10AP62906 217 aaKnown RBP22.94■■□□□ 1.26
SMAD1-201ENST00000302085 SEMA5AQ13591 1074 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 PSMD5Q16401 504 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 CCDC38Q502W7 563 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 GIPC2Q8TF65 315 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 SLC39A13Q96H72 371 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 FRMD8Q9BZ67 464 aaPredicted RBP22.94■■□□□ 1.26
SMAD1-201ENST00000302085 COMMD8Q9NX08 183 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 EURLQ9NYK6 297 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 SEPT10Q9P0V9 454 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 LGALS13Q9UHV8 139 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 TLR6Q9Y2C9 796 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 TEX264Q9Y6I9 313 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 A6NNZ2 444 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 NCAM2O15394 837 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 TBX18O95935 607 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 GALNT2Q10471 571 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 TUBB8Q3ZCM7 444 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 MANEALQ5VSG8 457 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 RWDD4Q6NW29 188 aaKnown RBP22.94■■□□□ 1.26
SMAD1-201ENST00000302085 C3orf62Q6ZUJ4 267 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 EXOC3L1Q86VI1 746 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 DNAJC5GQ8N7S2 189 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 ATP11CQ8NB49 1132 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 COLGALT1Q8NBJ5 622 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 CEP41Q9BYV8 373 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 PRDM5Q9NQX1 630 aaPredicted RBP22.94■■□□□ 1.26
SMAD1-201ENST00000302085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.94■■□□□ 1.26
SMAD1-201ENST00000302085 CLIC5Q9NZA1 410 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 CHMP2BQ9UQN3 213 aa22.94■■□□□ 1.26
SMAD1-201ENST00000302085 EXOC1LA0A1B0GW35 172 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 FOXO6A8MYZ6 492 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 STK10O94804 968 aaKnown RBP22.93■■□□□ 1.26
SMAD1-201ENST00000302085 HSPA8P11142 646 aaKnown RBP22.93■■□□□ 1.26
SMAD1-201ENST00000302085 ATF6P18850 670 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 TPSB2P20231 275 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 MMP13P45452 471 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 PPIDQ08752 370 aaKnown RBP22.93■■□□□ 1.26
SMAD1-201ENST00000302085 TPSAB1Q15661 275 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 SPOUT1Q5T280 376 aaKnown RBP22.93■■□□□ 1.26
SMAD1-201ENST00000302085 PALM2Q8IXS6 379 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 ZNF567Q8N184 647 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 RC3H2Q9HBD1 1191 aaKnown RBP22.93■■□□□ 1.26
SMAD1-201ENST00000302085 RABGEF1Q9UJ41 708 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 LTBP2Q14767 1821 aa22.93■■□□□ 1.26
SMAD1-201ENST00000302085 SLC38A8A6NNN8 435 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 C2CD2LO14523 706 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 KIAA0355O15063 1070 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 OPHN1O60890 802 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 HOXC13P31276 330 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 FDFT1P37268 417 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 EFEMP1Q12805 493 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 ZNF534Q76KX8 674 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 MDM1Q8TC05 714 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 FERMT1Q9BQL6 677 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 CLSTN3Q9BQT9 956 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 BRD8Q9H0E9 1235 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 TLR8Q9NR97 1041 aaKnown RBP22.92■■□□□ 1.26
SMAD1-201ENST00000302085 HS3ST4Q9Y661 456 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 GREB1Q4ZG55 1949 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 F5H423 210 aaPredicted RBP22.92■■□□□ 1.26
SMAD1-201ENST00000302085 KCNK1O00180 336 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 CDH16O75309 829 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 MOCS2O96007 188 aaPredicted RBP22.92■■□□□ 1.26
SMAD1-201ENST00000302085 TSHRP16473 764 aa22.92■■□□□ 1.26
SMAD1-201ENST00000302085 MLLT6P55198 1093 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms