RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 SNX31Q8N9S9 440 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SPATA22Q8NHS9 363 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 EMID1Q96A84 441 aaPredicted RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 RSRC1Q96IZ7 334 aaKnown RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 DHRS4Q9BTZ2 278 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 FAM124BQ9H5Z6 455 aaPredicted RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SSU72Q9NP77 194 aaKnown RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC24A2Q9UI40 661 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 FCHO1O14526 889 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 TPP1O14773 563 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 TYROBPO43914 113 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 STK10O94804 968 aaKnown RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 CCR10P46092 362 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 CCDC15Q0P6D6 951 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 USP4Q13107 963 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 MUM1Q2TAK8 710 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 PPP4R1Q8TF05 950 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 STMN2Q93045 179 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 VRTNQ9H8Y1 702 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC39A10Q9ULF5 831 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC15A5A6NIM6 579 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 PTPN1P18031 435 aaKnown RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 ERCC2P18074 760 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 GRM5P41594 1212 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 GABRB2P47870 512 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 POU5F1BQ06416 359 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 ITGA9Q13797 1035 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 ZNF460Q14592 562 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 CDKL3Q8IVW4 592 aaPredicted RBP16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SGIP1Q9BQI5 828 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
CHAF1A-201ENST00000301280 SOAT2O75908 522 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 ZWINTO95229 277 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 APOEP02649 317 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 ETFBP38117 255 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 RASSF2P50749 326 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 KPNB1Q14974 876 aaKnown RBP16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 TTC39BQ5VTQ0 682 aaPredicted RBP16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 ADGRD1Q6QNK2 874 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MIB1Q86YT6 1006 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MCUQ8NE86 351 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 SPDL1Q96EA4 605 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 TMEM209Q96SK2 561 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 DNAJC16Q9Y2G8 782 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 C2CD2Q9Y426 696 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MYO9BQ13459 2157 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 E7ESA3 106 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 E9PBE3 544 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MDM4O15151 490 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MAP3K13O43283 966 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 KLHL41O60662 606 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 PDE5AO76074 875 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 FAM200BP0CF97 657 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 CCNB1P14635 433 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MOGSQ13724 837 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 THOC5Q13769 683 aaKnown RBP16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 CYP4V2Q6ZWL3 525 aaPredicted RBP16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 BANPQ8N9N5 519 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 FAM13CQ8NE31 585 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 SNX27Q96L92 541 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 ZNF778Q96MU6 729 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 ABI2Q9NYB9 513 aaPredicted RBP16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 NOP53Q9NZM5 478 aaKnown RBP16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MPP6Q9NZW5 540 aa16.03■□□□□ 0.16
CHAF1A-201ENST00000301280 MT-CYBP00156 380 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 PBX3P40426 434 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 PSEN2P49810 448 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 CLNKQ7Z7G1 428 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 SHKBP1Q8TBC3 707 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 TNIP3Q96KP6 325 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 OMDQ99983 421 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 ARHGEF4Q9NR80 690 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 C20orf96Q9NUD7 363 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 MIOSQ9NXC5 875 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 ST3GAL5Q9UNP4 418 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 ITM2AO43736 263 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 TSPAN3O60637 253 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 SMNDC1O75940 238 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 KRT36O76013 467 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 TCN1P20061 433 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 CD52P31358 61 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 STX3Q13277 289 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 MAMDC4Q6UXC1 1216 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 CRLF3Q8IUI8 442 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 GBP7Q8N8V2 638 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 KBTBD7Q8WVZ9 684 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 SLC44A1Q8WWI5 657 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 FERMT1Q9BQL6 677 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 TKTL2Q9H0I9 626 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 CHRAC1Q9NRG0 131 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 IARS2Q9NSE4 1012 aaKnown RBP16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 PNPOQ9NVS9 261 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 TEX264Q9Y6I9 313 aa16.02■□□□□ 0.16
CHAF1A-201ENST00000301280 ANKRD12Q6UB98 2062 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms