RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 NAT8LQ8N9F0 302 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CCNYQ8ND76 341 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CLP1Q92989 425 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 C1orf74Q96LT6 269 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 ZNF512Q96ME7 567 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 PHACTR1Q9C0D0 580 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 KLC2Q9H0B6 622 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 EPB41L4BQ9H329 900 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 SNX10Q9Y5X0 201 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 ALPK3Q96L96 1907 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 KIAA1671Q9BY89 1806 aa16.2■□□□□ 0.18
HERPUD1-201ENST00000300302 CCDC85CA6NKD9 419 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 POLR3GO15318 223 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 CHADO15335 359 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 MOCS2O96007 188 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 NRLP54845 237 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 ZNF844Q08AG5 666 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 SLC29A2Q14542 456 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 PRKD1Q15139 912 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 CROCCP2Q86T23 111 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 MIB1Q86YT6 1006 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 PHOSPHO2Q8TCD6 241 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 DPF3Q92784 378 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 TBC1D31Q96DN5 1066 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 LGMNQ99538 433 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 RAD9AQ99638 391 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 RAB6BQ9NRW1 208 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 CXXC1Q9P0U4 656 aaPredicted RBP16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 YIPF1Q9Y548 306 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 SLC4A7Q9Y6M7 1214 aa16.19■□□□□ 0.18
HERPUD1-201ENST00000300302 TLR5O60602 858 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 TTC4O95801 387 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 CTSAP10619 480 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 MLLT6P55198 1093 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 ARL4CP56559 192 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 HIF1AQ16665 826 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 SNX30Q5VWJ9 437 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 PPP1R21Q6ZMI0 780 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 ARHGEF18Q6ZSZ5 1173 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 HERC6Q8IVU3 1022 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 TCEAL8Q8IYN2 117 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 CCDC33Q8N5R6 958 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 OR2W6PQ8NHA6 318 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 CCDC110Q8TBZ0 833 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 AUTS2Q8WXX7 1259 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 HERVK_113Q902F9 699 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 BTN2A3PQ96KV6 586 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 MYRFLQ96LU7 910 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 PWWP2AQ96N64 755 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 ZBP1Q9H171 429 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 DNAJC17Q9NVM6 304 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 VPS18Q9P253 973 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 XPO7Q9UIA9 1087 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 HS3ST4Q9Y661 456 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 TBX18O95935 607 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 HOXC13P31276 330 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 CA8P35219 290 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 MAGEA4P43358 317 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 RING1Q06587 406 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 MANEALQ5VSG8 457 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 TAB3Q8N5C8 712 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 LZTR1Q8N653 840 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 LRRN4Q8WUT4 740 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 TRMT2BQ96GJ1 504 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 TTC25Q96NG3 672 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 FRMD8Q9BZ67 464 aaPredicted RBP16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 NACA2Q9H009 215 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 CCSER2Q9H7U1 834 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 RXFP1Q9HBX9 757 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 SAYSD1Q9NPB0 183 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 DNMT3LQ9UJW3 386 aa16.18■□□□□ 0.18
HERPUD1-201ENST00000300302 A0A0A0MRY4 1105 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 SLC12A8A0AV02 714 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 E9PAM4 449 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 EIF3HO15372 352 aaKnown RBP eCLIP16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 TEX28O15482 410 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 MTSS1O43312 755 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 TLL1O43897 1013 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 ACSL3O95573 720 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 PPP3CCP48454 512 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 EPHB3P54753 998 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 COG7P83436 770 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 GALNT2Q10471 571 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 KCNJ11Q14654 390 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 ANKRD22Q5VYY1 191 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 NUGGCQ68CJ6 796 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 LRRC31Q6UY01 552 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 PDIK1LQ8N165 341 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 HDAC11Q96DB2 347 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 P2RY11Q96G91 374 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 SPATA13Q96N96 652 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 DONSONQ9NYP3 566 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 TRPM5Q9NZQ8 1165 aa16.17■□□□□ 0.18
HERPUD1-201ENST00000300302 UXTQ9UBK9 157 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms