RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 GOLGA2P5Q9HBQ8 144 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
CTDP1-202ENST00000299543 RLFQ13129 1914 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 H3BRB1 525 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 DNAJC6O75061 913 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 CNMDO75829 334 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 ENDOD1O94919 500 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 SLC25A27O95847 323 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 ASLP04424 464 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 GSTA2P09210 222 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 PPM1JQ5JR12 505 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 NOL9Q5SY16 702 aaKnown RBP13.83□□□□□ -0.2
CTDP1-202ENST00000299543 ZNF618Q5T7W0 954 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 PAOXQ6QHF9 649 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 EFCAB3Q8N7B9 438 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 NLGN2Q8NFZ4 835 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 HSPBAP1Q96EW2 488 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 EIF2AQ9BY44 585 aaKnown RBP13.83□□□□□ -0.2
CTDP1-202ENST00000299543 DNAJC16Q9Y2G8 782 aa13.83□□□□□ -0.2
CTDP1-202ENST00000299543 TRIP11Q15643 1979 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 KCNK1O00180 336 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 PSMG1O95456 288 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 VAV1P15498 845 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 NCF2P19878 526 aaPredicted RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 CA8P35219 290 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 N4BP2L1Q5TBK1 243 aaPredicted RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 C1orf146Q5VVC0 180 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 SH2D5Q6ZV89 423 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 COLGALT1Q8NBJ5 622 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ADAM32Q8TC27 787 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 PGBD4Q96DM1 585 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 SIGLEC10Q96LC7 697 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 OSMRQ99650 979 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 WWP1Q9H0M0 922 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 PLAC1Q9HBJ0 212 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 PAIP2BQ9ULR5 123 aaKnown RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 TRAFD1O14545 582 aaPredicted RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ITM2AO43736 263 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 TSPAN1O60635 241 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 CIB2O75838 187 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 GABBR2O75899 941 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ERVK-10P10266 1014 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ZNF24P17028 368 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 VARSP26640 1264 aaKnown RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 L1CAMP32004 1257 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 SLC26A2P50443 739 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 C6orf163Q5TEZ5 329 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ARHGAP18Q8N392 663 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 NAT14Q8WUY8 206 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 KCNN1Q92952 543 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ANKRD27Q96NW4 1050 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 KCTD15Q96SI1 283 aaPredicted RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 TBCBQ99426 244 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ZNF184Q99676 751 aaPredicted RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 EBF3Q9H4W6 596 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ZNF358Q9NW07 568 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ZNF180Q9UJW8 692 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 E7ENQ6 273 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 LMNAP02545 664 aaKnown RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ACAT1P24752 427 aaKnown RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 PITX1P78337 314 aaPredicted RBP13.82□□□□□ -0.2
CTDP1-202ENST00000299543 PID1Q7Z2X4 250 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 TP53INP2Q8IXH6 220 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 ARHGAP24Q8N264 748 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 CSPG4P5Q96PW8 444 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 CNTN3Q9P232 1028 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 TMCO1Q9UM00 188 aa13.82□□□□□ -0.2
CTDP1-202ENST00000299543 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 BCLAF3A2AJT9 711 aaKnown RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 HNRNPCL1O60812 293 aaKnown RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 SLC25A3Q00325 362 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 SLC34A1Q06495 639 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 KCTD21Q4G0X4 260 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 ZNF484Q5JVG2 852 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 LENG1Q96BZ8 264 aaPredicted RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 APOL2Q9BQE5 337 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 SNX25Q9H3E2 840 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 DTLQ9NZJ0 730 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 PSAT1Q9Y617 370 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 TRDMT1O14717 391 aaKnown RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 TPP1O14773 563 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 TGDSO95455 350 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 TSHRP16473 764 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 TYK2P29597 1187 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 GNL1P36915 607 aaPredicted RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 CCR3P51677 355 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 PEX6Q13608 980 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 R3HDM1Q15032 1099 aaKnown RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 VWA5B1Q5TIE3 1220 aa13.81□□□□□ -0.2
CTDP1-202ENST00000299543 WDR75Q8IWA0 830 aaKnown RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 TFB1MQ8WVM0 346 aaKnown RBP13.81□□□□□ -0.2
CTDP1-202ENST00000299543 HTR3CQ8WXA8 447 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms