RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CRTAMO95727 393 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 UBTFL6P0CB48 400 aaPredicted RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 ALOX12P18054 663 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ATP13A4Q4VNC1 1196 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 PDCD4Q53EL6 469 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 FNDC3BQ53EP0 1204 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 ZNF484Q5JVG2 852 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 SPPL2AQ8TCT8 520 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 RPH3AQ9Y2J0 694 aaPredicted RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 RPS6KL1Q9Y6S9 549 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TRIM49D1C9J1S8 452 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ATP9AO75110 1047 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 RPL19P84098 196 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 ABRQ12979 859 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 MAPK11Q15759 364 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 DSELQ8IZU8 1212 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 SGCDQ92629 289 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TESCQ96BS2 214 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ADGRE3Q9BY15 652 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 STK39Q9UEW8 545 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ENOPH1Q9UHY7 261 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TMCO1Q9UM00 188 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 PRKAB1Q9Y478 270 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TSPAN1O60635 241 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 RBP1P09455 135 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 NFKB1P19838 968 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 CYP2B6P20813 491 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 CUL2Q13617 745 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 DOK6Q6PKX4 331 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 MCEMP1Q8IX19 187 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 CCDC115Q96NT0 180 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 CEP44Q9C0F1 390 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 GANQ9H2C0 597 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 LRRC40Q9H9A6 602 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 METTL5Q9NRN9 209 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 XPR1Q9UBH6 696 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 GPC6Q9Y625 555 aaPredicted RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 OGTO15294 1046 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ASNA1O43681 348 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 STX11O75558 287 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 MYL4P12829 197 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 XRCC4Q13426 336 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TFDP3Q5H9I0 405 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 KLHDC7AQ5VTJ3 777 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 PEX5LQ8IYB4 626 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ZCCHC17Q9NP64 241 aaKnown RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
PCF11-201ENST00000298281 TBX20Q9UMR3 447 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 C17orf102A2RUQ5 167 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 ZNF185O15231 689 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 KLRC2P26717 231 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 IGFALSP35858 605 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TAF2Q6P1X5 1199 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 AIF1LQ9BQI0 150 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 SLC12A4Q9UP95 1085 aa12.32□□□□□ -0.44
PCF11-201ENST00000298281 MYL12BO14950 172 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 CYP11B2P19099 503 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 SLC26A2P50443 739 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 EPHB3P54753 998 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 C21orf59P57076 290 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 MTF1Q14872 753 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 RBM43Q6ZSC3 357 aaKnown RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 DPP3Q9NY33 737 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 SHOC2Q9UQ13 582 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 PLA2G6O60733 806 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 ITGB6P18564 788 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 ALDH3A2P51648 485 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 SNAP47Q5SQN1 464 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 RPRD1AQ96P16 312 aaPredicted RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 RBM12Q9NTZ6 932 aaKnown RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 RWDD3Q9Y3V2 267 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 FAM92AA1XBS5 289 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 BHMG1C9JSJ3 638 aaPredicted RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 NR5A2O00482 541 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 RAD51CO43502 376 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 ITGALP20701 1170 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 RGS1Q08116 209 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 MROH9Q5TGP6 573 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 FAM71DQ8N9W8 422 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 INTS7Q9NVH2 962 aaKnown RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 FAM153AQ9UHL3 310 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 IGF2BP3O00425 579 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCF11-201ENST00000298281 MTA2O94776 668 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 VDRP11473 427 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 THPOP40225 353 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 AMHR2Q16671 573 aa12.31□□□□□ -0.44
PCF11-201ENST00000298281 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 UBA2Q9UBT2 640 aaPredicted RBP12.31□□□□□ -0.44
PCF11-201ENST00000298281 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms